Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23515 and AZOBR_RS23520 are separated by 31 nucleotides AZOBR_RS23520 and AZOBR_RS23525 are separated by 4 nucleotides AZOBR_RS23525 and AZOBR_RS23530 are separated by 13 nucleotides
AZOBR_RS23515: AZOBR_RS23515 - ABC transporter permease, at 305,137 to 305,799
_RS23515
AZOBR_RS23520: AZOBR_RS23520 - ABC transporter permease, at 305,831 to 306,493
_RS23520
AZOBR_RS23525: AZOBR_RS23525 - ABC transporter ATP-binding protein, at 306,498 to 307,307
_RS23525
AZOBR_RS23530: AZOBR_RS23530 - putative Major facilitator family transporter, at 307,321 to 308,514
_RS23530
Position (kb) 306
307
308 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 305.618 kb on - strand, within AZOBR_RS23515 at 305.618 kb on - strand, within AZOBR_RS23515 at 305.987 kb on + strand, within AZOBR_RS23520 at 305.987 kb on + strand, within AZOBR_RS23520 at 305.988 kb on - strand, within AZOBR_RS23520 at 305.988 kb on - strand, within AZOBR_RS23520 at 305.988 kb on - strand, within AZOBR_RS23520 at 306.006 kb on - strand, within AZOBR_RS23520 at 306.125 kb on + strand, within AZOBR_RS23520 at 306.125 kb on + strand, within AZOBR_RS23520 at 306.125 kb on + strand, within AZOBR_RS23520 at 306.125 kb on + strand, within AZOBR_RS23520 at 306.126 kb on - strand, within AZOBR_RS23520 at 306.126 kb on - strand, within AZOBR_RS23520 at 306.126 kb on - strand, within AZOBR_RS23520 at 306.137 kb on + strand, within AZOBR_RS23520 at 306.137 kb on + strand, within AZOBR_RS23520 at 306.137 kb on + strand, within AZOBR_RS23520 at 306.137 kb on + strand, within AZOBR_RS23520 at 306.138 kb on - strand, within AZOBR_RS23520 at 306.219 kb on - strand, within AZOBR_RS23520 at 306.398 kb on + strand, within AZOBR_RS23520 at 306.399 kb on - strand, within AZOBR_RS23520 at 306.419 kb on + strand, within AZOBR_RS23520 at 306.419 kb on + strand, within AZOBR_RS23520 at 306.419 kb on + strand, within AZOBR_RS23520 at 306.420 kb on - strand, within AZOBR_RS23520 at 306.420 kb on - strand, within AZOBR_RS23520 at 306.420 kb on - strand, within AZOBR_RS23520 at 306.420 kb on - strand, within AZOBR_RS23520 at 306.492 kb on - strand at 306.519 kb on + strand at 306.520 kb on - strand at 306.909 kb on + strand, within AZOBR_RS23525 at 307.489 kb on + strand, within AZOBR_RS23530 at 307.490 kb on - strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.844 kb on - strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.928 kb on - strand, within AZOBR_RS23530 at 308.272 kb on + strand, within AZOBR_RS23530 at 308.273 kb on - strand, within AZOBR_RS23530
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 305,618 - AZOBR_RS23515 0.73 -0.7 305,618 - AZOBR_RS23515 0.73 -1.7 305,987 + AZOBR_RS23520 0.24 -1.2 305,987 + AZOBR_RS23520 0.24 +1.1 305,988 - AZOBR_RS23520 0.24 -0.5 305,988 - AZOBR_RS23520 0.24 +0.2 305,988 - AZOBR_RS23520 0.24 -0.3 306,006 - AZOBR_RS23520 0.26 +0.6 306,125 + AZOBR_RS23520 0.44 +0.5 306,125 + AZOBR_RS23520 0.44 +0.3 306,125 + AZOBR_RS23520 0.44 -0.2 306,125 + AZOBR_RS23520 0.44 +0.5 306,126 - AZOBR_RS23520 0.44 -0.1 306,126 - AZOBR_RS23520 0.44 +0.2 306,126 - AZOBR_RS23520 0.44 -0.0 306,137 + AZOBR_RS23520 0.46 +0.0 306,137 + AZOBR_RS23520 0.46 +0.1 306,137 + AZOBR_RS23520 0.46 +0.6 306,137 + AZOBR_RS23520 0.46 -0.7 306,138 - AZOBR_RS23520 0.46 -1.5 306,219 - AZOBR_RS23520 0.59 -1.2 306,398 + AZOBR_RS23520 0.86 +0.5 306,399 - AZOBR_RS23520 0.86 -0.6 306,419 + AZOBR_RS23520 0.89 -0.1 306,419 + AZOBR_RS23520 0.89 -2.8 306,419 + AZOBR_RS23520 0.89 -3.1 306,420 - AZOBR_RS23520 0.89 +1.5 306,420 - AZOBR_RS23520 0.89 -0.7 306,420 - AZOBR_RS23520 0.89 +0.1 306,420 - AZOBR_RS23520 0.89 +0.9 306,492 - +0.0 306,519 + +0.3 306,520 - +1.9 306,909 + AZOBR_RS23525 0.51 -0.6 307,489 + AZOBR_RS23530 0.14 -1.2 307,490 - AZOBR_RS23530 0.14 -1.3 307,663 + AZOBR_RS23530 0.29 +0.9 307,663 + AZOBR_RS23530 0.29 -0.2 307,663 + AZOBR_RS23530 0.29 -0.7 307,664 - AZOBR_RS23530 0.29 +0.2 307,664 - AZOBR_RS23530 0.29 +1.1 307,664 - AZOBR_RS23530 0.29 -0.1 307,664 - AZOBR_RS23530 0.29 +0.0 307,744 + AZOBR_RS23530 0.35 -0.7 307,744 + AZOBR_RS23530 0.35 +0.4 307,744 + AZOBR_RS23530 0.35 +0.5 307,844 - AZOBR_RS23530 0.44 -2.0 307,927 + AZOBR_RS23530 0.51 +0.2 307,927 + AZOBR_RS23530 0.51 -2.3 307,927 + AZOBR_RS23530 0.51 +1.1 307,927 + AZOBR_RS23530 0.51 -1.3 307,927 + AZOBR_RS23530 0.51 +0.6 307,927 + AZOBR_RS23530 0.51 -1.6 307,928 - AZOBR_RS23530 0.51 +0.4 308,272 + AZOBR_RS23530 0.80 -1.0 308,273 - AZOBR_RS23530 0.80 -1.2
Or see this region's nucleotide sequence