Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20285 and AZOBR_RS20290 are separated by 79 nucleotides AZOBR_RS20290 and AZOBR_RS20295 are separated by 133 nucleotides AZOBR_RS20295 and AZOBR_RS20300 are separated by 90 nucleotides AZOBR_RS20300 and AZOBR_RS20305 are separated by 107 nucleotides
AZOBR_RS20285: AZOBR_RS20285 - hypothetical protein, at 1,321,578 to 1,322,786
_RS20285
AZOBR_RS20290: AZOBR_RS20290 - dihydroneopterin aldolase, at 1,322,866 to 1,323,249
_RS20290
AZOBR_RS20295: AZOBR_RS20295 - modification methylase, at 1,323,383 to 1,324,468
_RS20295
AZOBR_RS20300: AZOBR_RS20300 - ribonuclease HII, at 1,324,559 to 1,325,173
_RS20300
AZOBR_RS20305: AZOBR_RS20305 - cAMP-binding protein, at 1,325,281 to 1,326,003
_RS20305
Position (kb) 1323
1324
1325 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1322.430 kb on + strand, within AZOBR_RS20285 at 1322.431 kb on - strand, within AZOBR_RS20285 at 1322.529 kb on + strand, within AZOBR_RS20285 at 1322.529 kb on + strand, within AZOBR_RS20285 at 1322.529 kb on + strand, within AZOBR_RS20285 at 1322.529 kb on + strand, within AZOBR_RS20285 at 1322.529 kb on + strand, within AZOBR_RS20285 at 1322.529 kb on + strand, within AZOBR_RS20285 at 1322.530 kb on - strand, within AZOBR_RS20285 at 1322.530 kb on - strand, within AZOBR_RS20285 at 1322.530 kb on - strand, within AZOBR_RS20285 at 1322.634 kb on - strand, within AZOBR_RS20285 at 1322.700 kb on + strand at 1322.700 kb on + strand at 1322.701 kb on - strand at 1322.701 kb on - strand at 1322.701 kb on - strand at 1322.718 kb on - strand at 1324.687 kb on - strand, within AZOBR_RS20300 at 1324.876 kb on - strand, within AZOBR_RS20300 at 1325.297 kb on + strand at 1325.297 kb on + strand at 1325.298 kb on - strand at 1325.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,322,430 + AZOBR_RS20285 0.70 +0.4 1,322,431 - AZOBR_RS20285 0.71 -0.7 1,322,529 + AZOBR_RS20285 0.79 +0.5 1,322,529 + AZOBR_RS20285 0.79 -1.3 1,322,529 + AZOBR_RS20285 0.79 -0.5 1,322,529 + AZOBR_RS20285 0.79 +0.0 1,322,529 + AZOBR_RS20285 0.79 +0.9 1,322,529 + AZOBR_RS20285 0.79 +1.9 1,322,530 - AZOBR_RS20285 0.79 +0.8 1,322,530 - AZOBR_RS20285 0.79 -0.0 1,322,530 - AZOBR_RS20285 0.79 +0.5 1,322,634 - AZOBR_RS20285 0.87 -0.4 1,322,700 + -2.5 1,322,700 + +1.2 1,322,701 - +0.5 1,322,701 - -1.1 1,322,701 - +1.1 1,322,718 - +1.4 1,324,687 - AZOBR_RS20300 0.21 +0.3 1,324,876 - AZOBR_RS20300 0.52 -1.4 1,325,297 + -2.8 1,325,297 + +0.2 1,325,298 - +0.9 1,325,298 - -0.8
Or see this region's nucleotide sequence