Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20265 and AZOBR_RS20270 are separated by 123 nucleotides AZOBR_RS20270 and AZOBR_RS20275 are separated by 128 nucleotides AZOBR_RS20275 and AZOBR_RS20280 are separated by 38 nucleotides
AZOBR_RS20265: AZOBR_RS20265 - conserved exported protein of unknown function, at 1,316,901 to 1,317,566
_RS20265
AZOBR_RS20270: AZOBR_RS20270 - hypothetical protein, at 1,317,690 to 1,318,169
_RS20270
AZOBR_RS20275: AZOBR_RS20275 - adenine glycosylase, at 1,318,298 to 1,319,380
_RS20275
AZOBR_RS20280: AZOBR_RS20280 - hypothetical protein, at 1,319,419 to 1,320,180
_RS20280
Position (kb) 1318
1319
1320 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1317.299 kb on - strand, within AZOBR_RS20265 at 1317.368 kb on - strand, within AZOBR_RS20265 at 1317.643 kb on + strand at 1317.644 kb on - strand at 1317.692 kb on - strand at 1318.284 kb on + strand at 1318.284 kb on + strand at 1318.284 kb on + strand at 1318.580 kb on + strand, within AZOBR_RS20275 at 1318.584 kb on - strand, within AZOBR_RS20275 at 1318.604 kb on + strand, within AZOBR_RS20275 at 1318.605 kb on - strand at 1318.605 kb on - strand, within AZOBR_RS20275 at 1318.694 kb on + strand, within AZOBR_RS20275 at 1318.695 kb on - strand, within AZOBR_RS20275 at 1318.695 kb on - strand, within AZOBR_RS20275 at 1318.696 kb on + strand, within AZOBR_RS20275 at 1318.696 kb on + strand, within AZOBR_RS20275 at 1318.697 kb on - strand, within AZOBR_RS20275 at 1319.378 kb on + strand at 1319.378 kb on + strand at 1319.979 kb on + strand, within AZOBR_RS20280 at 1319.980 kb on - strand, within AZOBR_RS20280 at 1320.028 kb on + strand, within AZOBR_RS20280
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,317,299 - AZOBR_RS20265 0.60 -1.4 1,317,368 - AZOBR_RS20265 0.70 -1.1 1,317,643 + -0.4 1,317,644 - +0.6 1,317,692 - -1.1 1,318,284 + -0.1 1,318,284 + -1.1 1,318,284 + -2.6 1,318,580 + AZOBR_RS20275 0.26 +0.7 1,318,584 - AZOBR_RS20275 0.26 -1.9 1,318,604 + AZOBR_RS20275 0.28 -1.3 1,318,605 - +1.9 1,318,605 - AZOBR_RS20275 0.28 -1.6 1,318,694 + AZOBR_RS20275 0.37 -0.1 1,318,695 - AZOBR_RS20275 0.37 -2.0 1,318,695 - AZOBR_RS20275 0.37 -0.4 1,318,696 + AZOBR_RS20275 0.37 +0.3 1,318,696 + AZOBR_RS20275 0.37 -1.6 1,318,697 - AZOBR_RS20275 0.37 +1.0 1,319,378 + -0.7 1,319,378 + +0.6 1,319,979 + AZOBR_RS20280 0.73 +0.5 1,319,980 - AZOBR_RS20280 0.74 -0.5 1,320,028 + AZOBR_RS20280 0.80 -0.5
Or see this region's nucleotide sequence