Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19340 and AZOBR_RS19345 are separated by 64 nucleotides AZOBR_RS19345 and AZOBR_RS19350 are separated by 579 nucleotides
AZOBR_RS19340: AZOBR_RS19340 - long-chain fatty acid--CoA ligase, at 1,108,562 to 1,110,121
_RS19340
AZOBR_RS19345: AZOBR_RS19345 - acyl carrier protein, at 1,110,186 to 1,110,449
_RS19345
AZOBR_RS19350: AZOBR_RS19350 - polysaccharide deacetylase, at 1,111,029 to 1,111,877
_RS19350
Position (kb)
1110
1111 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1109.263 kb on - strand, within AZOBR_RS19340 at 1109.263 kb on - strand, within AZOBR_RS19340 at 1109.514 kb on + strand, within AZOBR_RS19340 at 1109.515 kb on - strand, within AZOBR_RS19340 at 1109.515 kb on - strand, within AZOBR_RS19340 at 1109.515 kb on - strand, within AZOBR_RS19340 at 1109.598 kb on + strand, within AZOBR_RS19340 at 1109.598 kb on + strand, within AZOBR_RS19340 at 1109.599 kb on - strand, within AZOBR_RS19340 at 1109.599 kb on - strand, within AZOBR_RS19340 at 1109.599 kb on - strand, within AZOBR_RS19340 at 1109.841 kb on + strand, within AZOBR_RS19340 at 1109.841 kb on + strand, within AZOBR_RS19340 at 1109.841 kb on + strand, within AZOBR_RS19340 at 1109.841 kb on + strand, within AZOBR_RS19340 at 1109.841 kb on + strand, within AZOBR_RS19340 at 1109.841 kb on + strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.842 kb on - strand, within AZOBR_RS19340 at 1109.883 kb on + strand, within AZOBR_RS19340 at 1109.883 kb on + strand, within AZOBR_RS19340 at 1109.883 kb on + strand, within AZOBR_RS19340 at 1109.883 kb on + strand, within AZOBR_RS19340 at 1109.925 kb on + strand, within AZOBR_RS19340 at 1109.926 kb on - strand, within AZOBR_RS19340 at 1109.926 kb on - strand, within AZOBR_RS19340 at 1110.668 kb on - strand at 1110.679 kb on + strand at 1110.776 kb on + strand at 1110.776 kb on + strand at 1110.776 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,109,263 - AZOBR_RS19340 0.45 +1.2 1,109,263 - AZOBR_RS19340 0.45 +1.4 1,109,514 + AZOBR_RS19340 0.61 -0.8 1,109,515 - AZOBR_RS19340 0.61 -0.1 1,109,515 - AZOBR_RS19340 0.61 -2.0 1,109,515 - AZOBR_RS19340 0.61 -2.0 1,109,598 + AZOBR_RS19340 0.66 -1.3 1,109,598 + AZOBR_RS19340 0.66 +0.4 1,109,599 - AZOBR_RS19340 0.66 -1.4 1,109,599 - AZOBR_RS19340 0.66 -1.3 1,109,599 - AZOBR_RS19340 0.66 +2.1 1,109,841 + AZOBR_RS19340 0.82 -0.4 1,109,841 + AZOBR_RS19340 0.82 +0.3 1,109,841 + AZOBR_RS19340 0.82 -2.2 1,109,841 + AZOBR_RS19340 0.82 -3.0 1,109,841 + AZOBR_RS19340 0.82 -1.1 1,109,841 + AZOBR_RS19340 0.82 -0.1 1,109,842 - AZOBR_RS19340 0.82 +0.3 1,109,842 - AZOBR_RS19340 0.82 +0.8 1,109,842 - AZOBR_RS19340 0.82 -0.0 1,109,842 - AZOBR_RS19340 0.82 +0.1 1,109,842 - AZOBR_RS19340 0.82 -1.2 1,109,842 - AZOBR_RS19340 0.82 +0.5 1,109,842 - AZOBR_RS19340 0.82 -2.6 1,109,883 + AZOBR_RS19340 0.85 +0.1 1,109,883 + AZOBR_RS19340 0.85 +0.9 1,109,883 + AZOBR_RS19340 0.85 -0.5 1,109,883 + AZOBR_RS19340 0.85 -0.5 1,109,925 + AZOBR_RS19340 0.87 -4.0 1,109,926 - AZOBR_RS19340 0.87 -0.1 1,109,926 - AZOBR_RS19340 0.87 +0.2 1,110,668 - -0.3 1,110,679 + -0.4 1,110,776 + +1.0 1,110,776 + +0.7 1,110,776 + +0.3
Or see this region's nucleotide sequence