Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17520 and AZOBR_RS17525 are separated by 97 nucleotides AZOBR_RS17525 and AZOBR_RS17530 are separated by 277 nucleotides
AZOBR_RS17520: AZOBR_RS17520 - hypothetical protein, at 685,455 to 687,371
_RS17520
AZOBR_RS17525: AZOBR_RS17525 - conserved hypothetical protein; putative amidase and SAM domains, at 687,469 to 688,545
_RS17525
AZOBR_RS17530: AZOBR_RS17530 - tyrosyl-tRNA synthetase, at 688,823 to 690,097
_RS17530
Position (kb) 687
688
689 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 686.732 kb on - strand, within AZOBR_RS17520 at 686.737 kb on + strand, within AZOBR_RS17520 at 687.247 kb on + strand at 687.247 kb on + strand at 687.248 kb on - strand at 687.641 kb on + strand, within AZOBR_RS17525 at 687.641 kb on + strand, within AZOBR_RS17525 at 687.641 kb on + strand, within AZOBR_RS17525 at 687.642 kb on - strand, within AZOBR_RS17525 at 687.764 kb on + strand, within AZOBR_RS17525 at 687.764 kb on + strand, within AZOBR_RS17525 at 687.765 kb on - strand, within AZOBR_RS17525 at 687.765 kb on - strand, within AZOBR_RS17525 at 687.765 kb on - strand, within AZOBR_RS17525 at 688.272 kb on - strand, within AZOBR_RS17525 at 688.298 kb on + strand, within AZOBR_RS17525 at 688.481 kb on + strand at 688.482 kb on - strand at 688.650 kb on + strand at 688.693 kb on + strand at 688.693 kb on + strand at 688.696 kb on + strand at 688.696 kb on + strand at 688.697 kb on - strand at 688.697 kb on - strand at 688.697 kb on - strand at 688.697 kb on - strand at 688.698 kb on + strand at 688.698 kb on + strand at 688.698 kb on + strand at 688.698 kb on + strand at 688.699 kb on - strand at 688.699 kb on - strand at 688.711 kb on + strand at 688.737 kb on + strand at 688.737 kb on + strand at 688.738 kb on - strand at 688.956 kb on - strand, within AZOBR_RS17530 at 689.177 kb on + strand, within AZOBR_RS17530 at 689.252 kb on + strand, within AZOBR_RS17530 at 689.252 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.369 kb on + strand, within AZOBR_RS17530 at 689.370 kb on - strand, within AZOBR_RS17530 at 689.370 kb on - strand, within AZOBR_RS17530 at 689.370 kb on - strand, within AZOBR_RS17530 at 689.370 kb on - strand, within AZOBR_RS17530 at 689.370 kb on - strand, within AZOBR_RS17530
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 686,732 - AZOBR_RS17520 0.67 -2.3 686,737 + AZOBR_RS17520 0.67 +0.1 687,247 + -0.4 687,247 + -0.5 687,248 - -1.0 687,641 + AZOBR_RS17525 0.16 -1.3 687,641 + AZOBR_RS17525 0.16 +0.1 687,641 + AZOBR_RS17525 0.16 -0.9 687,642 - AZOBR_RS17525 0.16 -1.3 687,764 + AZOBR_RS17525 0.27 -0.9 687,764 + AZOBR_RS17525 0.27 -0.3 687,765 - AZOBR_RS17525 0.27 -1.3 687,765 - AZOBR_RS17525 0.27 +0.4 687,765 - AZOBR_RS17525 0.27 -3.6 688,272 - AZOBR_RS17525 0.75 -1.5 688,298 + AZOBR_RS17525 0.77 +1.0 688,481 + -2.1 688,482 - -0.3 688,650 + +0.0 688,693 + -0.6 688,693 + -0.4 688,696 + -1.1 688,696 + -1.2 688,697 - +0.5 688,697 - -1.0 688,697 - +0.4 688,697 - +0.4 688,698 + +1.5 688,698 + -0.8 688,698 + -0.4 688,698 + -2.5 688,699 - +0.1 688,699 - -1.0 688,711 + -0.5 688,737 + -0.6 688,737 + -2.8 688,738 - +0.2 688,956 - AZOBR_RS17530 0.10 -0.2 689,177 + AZOBR_RS17530 0.28 +0.7 689,252 + AZOBR_RS17530 0.34 -2.6 689,252 + AZOBR_RS17530 0.34 -1.1 689,369 + AZOBR_RS17530 0.43 +1.4 689,369 + AZOBR_RS17530 0.43 +2.6 689,369 + AZOBR_RS17530 0.43 -1.3 689,369 + AZOBR_RS17530 0.43 -2.3 689,369 + AZOBR_RS17530 0.43 +0.9 689,369 + AZOBR_RS17530 0.43 -0.3 689,369 + AZOBR_RS17530 0.43 +0.9 689,370 - AZOBR_RS17530 0.43 -1.4 689,370 - AZOBR_RS17530 0.43 -0.6 689,370 - AZOBR_RS17530 0.43 +0.4 689,370 - AZOBR_RS17530 0.43 -0.4 689,370 - AZOBR_RS17530 0.43 +0.6
Or see this region's nucleotide sequence