Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16825 and AZOBR_RS16830 are separated by 152 nucleotides AZOBR_RS16830 and AZOBR_RS16835 overlap by 1 nucleotides AZOBR_RS16835 and AZOBR_RS16840 overlap by 4 nucleotides
AZOBR_RS16825: AZOBR_RS16825 - putative methyl-accepting chemotaxis protein, at 533,739 to 535,451
_RS16825
AZOBR_RS16830: AZOBR_RS16830 - ABC transporter, at 535,604 to 536,329
_RS16830
AZOBR_RS16835: AZOBR_RS16835 - branched-chain amino acid ABC transporter, at 536,329 to 537,318
_RS16835
AZOBR_RS16840: AZOBR_RS16840 - branched-chain amino acid ABC transporter, at 537,315 to 538,028
_RS16840
Position (kb) 536
537
538 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 535.609 kb on + strand at 535.626 kb on + strand at 535.627 kb on - strand at 535.627 kb on - strand at 536.403 kb on - strand at 536.432 kb on + strand, within AZOBR_RS16835 at 536.631 kb on - strand, within AZOBR_RS16835 at 536.831 kb on + strand, within AZOBR_RS16835 at 536.832 kb on - strand, within AZOBR_RS16835 at 536.834 kb on + strand, within AZOBR_RS16835 at 536.835 kb on - strand, within AZOBR_RS16835 at 536.835 kb on - strand, within AZOBR_RS16835 at 536.835 kb on - strand, within AZOBR_RS16835 at 536.835 kb on - strand, within AZOBR_RS16835 at 536.835 kb on - strand, within AZOBR_RS16835 at 536.835 kb on - strand, within AZOBR_RS16835 at 537.119 kb on + strand, within AZOBR_RS16835 at 537.120 kb on - strand, within AZOBR_RS16835 at 537.137 kb on + strand, within AZOBR_RS16835 at 537.203 kb on + strand, within AZOBR_RS16835 at 537.203 kb on + strand, within AZOBR_RS16835 at 537.243 kb on - strand at 537.376 kb on + strand at 537.376 kb on + strand at 537.376 kb on + strand at 537.376 kb on + strand at 537.377 kb on - strand at 537.377 kb on - strand at 537.517 kb on + strand, within AZOBR_RS16840 at 537.518 kb on - strand, within AZOBR_RS16840 at 538.169 kb on + strand at 538.170 kb on - strand at 538.173 kb on - strand at 538.234 kb on + strand at 538.235 kb on - strand at 538.235 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 535,609 + +0.1 535,626 + +1.6 535,627 - -0.7 535,627 - -1.6 536,403 - +0.1 536,432 + AZOBR_RS16835 0.10 -0.0 536,631 - AZOBR_RS16835 0.31 -1.2 536,831 + AZOBR_RS16835 0.51 +1.0 536,832 - AZOBR_RS16835 0.51 +1.6 536,834 + AZOBR_RS16835 0.51 +1.0 536,835 - AZOBR_RS16835 0.51 -1.1 536,835 - AZOBR_RS16835 0.51 -0.6 536,835 - AZOBR_RS16835 0.51 -1.8 536,835 - AZOBR_RS16835 0.51 -0.6 536,835 - AZOBR_RS16835 0.51 +0.1 536,835 - AZOBR_RS16835 0.51 -0.9 537,119 + AZOBR_RS16835 0.80 -0.4 537,120 - AZOBR_RS16835 0.80 -1.9 537,137 + AZOBR_RS16835 0.82 +0.4 537,203 + AZOBR_RS16835 0.88 +2.0 537,203 + AZOBR_RS16835 0.88 +1.0 537,243 - -0.5 537,376 + +2.0 537,376 + -0.4 537,376 + -1.5 537,376 + +2.8 537,377 - -0.5 537,377 - -0.9 537,517 + AZOBR_RS16840 0.28 +0.6 537,518 - AZOBR_RS16840 0.28 -0.4 538,169 + -1.9 538,170 - -2.0 538,173 - -0.7 538,234 + +0.3 538,235 - -1.3 538,235 - -1.9
Or see this region's nucleotide sequence