Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16785 and AZOBR_RS16790 are separated by 317 nucleotides AZOBR_RS16790 and AZOBR_RS16795 are separated by 315 nucleotides
AZOBR_RS16785: AZOBR_RS16785 - hypothetical protein, at 523,190 to 523,429
_RS16785
AZOBR_RS16790: AZOBR_RS16790 - hypothetical protein, at 523,747 to 525,291
_RS16790
AZOBR_RS16795: AZOBR_RS16795 - hypothetical protein, at 525,607 to 527,181
_RS16795
Position (kb) 523
524
525
526 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 523.095 kb on + strand at 523.488 kb on + strand at 523.488 kb on + strand at 523.522 kb on - strand at 523.522 kb on - strand at 523.528 kb on + strand at 523.585 kb on + strand at 523.585 kb on + strand at 523.586 kb on - strand at 523.651 kb on - strand at 523.853 kb on - strand at 523.853 kb on - strand at 524.114 kb on - strand, within AZOBR_RS16790 at 524.116 kb on + strand, within AZOBR_RS16790 at 524.116 kb on + strand, within AZOBR_RS16790 at 524.116 kb on + strand, within AZOBR_RS16790 at 524.116 kb on + strand, within AZOBR_RS16790 at 524.117 kb on - strand, within AZOBR_RS16790 at 524.117 kb on - strand, within AZOBR_RS16790 at 524.117 kb on - strand, within AZOBR_RS16790 at 524.360 kb on - strand, within AZOBR_RS16790 at 524.360 kb on - strand, within AZOBR_RS16790 at 524.614 kb on + strand, within AZOBR_RS16790 at 524.614 kb on + strand, within AZOBR_RS16790 at 524.615 kb on - strand, within AZOBR_RS16790 at 524.662 kb on + strand, within AZOBR_RS16790 at 524.662 kb on + strand, within AZOBR_RS16790 at 524.662 kb on + strand, within AZOBR_RS16790 at 524.662 kb on + strand, within AZOBR_RS16790 at 524.663 kb on - strand, within AZOBR_RS16790 at 524.737 kb on + strand, within AZOBR_RS16790 at 524.826 kb on + strand, within AZOBR_RS16790 at 524.827 kb on - strand, within AZOBR_RS16790 at 525.074 kb on + strand, within AZOBR_RS16790 at 525.075 kb on - strand, within AZOBR_RS16790 at 525.075 kb on - strand, within AZOBR_RS16790 at 525.075 kb on - strand, within AZOBR_RS16790 at 525.093 kb on + strand, within AZOBR_RS16790 at 525.216 kb on + strand at 525.248 kb on - strand at 525.248 kb on - strand at 525.308 kb on - strand at 525.412 kb on + strand at 525.412 kb on + strand at 525.413 kb on - strand at 525.458 kb on - strand at 525.472 kb on - strand at 525.664 kb on + strand at 525.664 kb on + strand at 525.664 kb on + strand at 525.664 kb on + strand at 525.664 kb on + strand at 525.665 kb on - strand at 525.665 kb on - strand at 525.665 kb on - strand at 525.665 kb on - strand at 525.665 kb on - strand at 525.665 kb on - strand at 525.736 kb on + strand at 525.736 kb on + strand at 525.736 kb on + strand at 525.737 kb on - strand at 525.737 kb on - strand at 525.737 kb on - strand at 525.737 kb on - strand at 525.737 kb on - strand at 525.895 kb on - strand, within AZOBR_RS16795 at 525.998 kb on - strand, within AZOBR_RS16795 at 525.998 kb on - strand, within AZOBR_RS16795 at 526.245 kb on + strand, within AZOBR_RS16795 at 526.246 kb on - strand, within AZOBR_RS16795 at 526.246 kb on - strand, within AZOBR_RS16795
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 523,095 + -3.6 523,488 + +0.4 523,488 + +1.3 523,522 - -0.7 523,522 - -0.1 523,528 + +0.1 523,585 + +1.0 523,585 + -1.1 523,586 - -1.1 523,651 - -0.5 523,853 - -0.0 523,853 - -0.4 524,114 - AZOBR_RS16790 0.24 -2.4 524,116 + AZOBR_RS16790 0.24 -0.4 524,116 + AZOBR_RS16790 0.24 -1.8 524,116 + AZOBR_RS16790 0.24 -2.8 524,116 + AZOBR_RS16790 0.24 -1.9 524,117 - AZOBR_RS16790 0.24 -0.6 524,117 - AZOBR_RS16790 0.24 +0.4 524,117 - AZOBR_RS16790 0.24 -0.4 524,360 - AZOBR_RS16790 0.40 -1.4 524,360 - AZOBR_RS16790 0.40 +0.6 524,614 + AZOBR_RS16790 0.56 -1.9 524,614 + AZOBR_RS16790 0.56 -2.3 524,615 - AZOBR_RS16790 0.56 -4.1 524,662 + AZOBR_RS16790 0.59 -0.6 524,662 + AZOBR_RS16790 0.59 -0.4 524,662 + AZOBR_RS16790 0.59 -3.3 524,662 + AZOBR_RS16790 0.59 -2.2 524,663 - AZOBR_RS16790 0.59 -2.5 524,737 + AZOBR_RS16790 0.64 -1.9 524,826 + AZOBR_RS16790 0.70 -1.3 524,827 - AZOBR_RS16790 0.70 +2.0 525,074 + AZOBR_RS16790 0.86 -1.0 525,075 - AZOBR_RS16790 0.86 +1.0 525,075 - AZOBR_RS16790 0.86 -0.4 525,075 - AZOBR_RS16790 0.86 +1.3 525,093 + AZOBR_RS16790 0.87 +1.1 525,216 + +0.4 525,248 - +0.4 525,248 - -1.2 525,308 - -1.5 525,412 + +0.1 525,412 + -1.6 525,413 - -0.4 525,458 - -0.4 525,472 - -0.9 525,664 + -0.1 525,664 + +0.3 525,664 + -0.6 525,664 + -2.9 525,664 + -4.1 525,665 - -0.6 525,665 - -2.0 525,665 - -0.0 525,665 - -0.0 525,665 - +0.4 525,665 - +1.0 525,736 + +2.0 525,736 + -1.6 525,736 + -0.4 525,737 - -1.0 525,737 - -2.0 525,737 - -1.8 525,737 - -1.4 525,737 - -0.2 525,895 - AZOBR_RS16795 0.18 +1.0 525,998 - AZOBR_RS16795 0.25 -0.6 525,998 - AZOBR_RS16795 0.25 -0.4 526,245 + AZOBR_RS16795 0.41 -3.5 526,246 - AZOBR_RS16795 0.41 -0.9 526,246 - AZOBR_RS16795 0.41 +0.8
Or see this region's nucleotide sequence