Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14570 and AZOBR_RS14575 are separated by 220 nucleotides AZOBR_RS14575 and AZOBR_RS14580 are separated by 103 nucleotides AZOBR_RS14580 and AZOBR_RS14585 are separated by 57 nucleotides AZOBR_RS14585 and AZOBR_RS14590 are separated by 202 nucleotides
AZOBR_RS14570: AZOBR_RS14570 - hypothetical protein, at 38,362 to 38,997
_RS14570
AZOBR_RS14575: AZOBR_RS14575 - hypothetical protein, at 39,218 to 39,538
_RS14575
AZOBR_RS14580: AZOBR_RS14580 - homoserine O-acetyltransferase, at 39,642 to 40,838
_RS14580
AZOBR_RS14585: AZOBR_RS14585 - hypothetical protein, at 40,896 to 41,369
_RS14585
AZOBR_RS14590: AZOBR_RS14590 - cell division protein, at 41,572 to 41,943
_RS14590
Position (kb) 39
40
41 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 39.029 kb on + strand at 39.029 kb on + strand at 39.029 kb on + strand at 39.030 kb on - strand at 39.030 kb on - strand at 39.031 kb on + strand at 39.032 kb on - strand at 39.032 kb on - strand at 39.593 kb on + strand at 39.593 kb on + strand at 39.594 kb on - strand at 39.594 kb on - strand at 39.673 kb on + strand at 39.759 kb on + strand at 39.759 kb on + strand at 39.759 kb on + strand at 39.760 kb on - strand at 39.895 kb on - strand, within AZOBR_RS14580 at 39.895 kb on - strand, within AZOBR_RS14580 at 40.344 kb on + strand, within AZOBR_RS14580 at 40.491 kb on + strand, within AZOBR_RS14580 at 40.743 kb on + strand at 40.909 kb on + strand at 40.910 kb on - strand at 40.942 kb on + strand at 40.943 kb on - strand at 40.979 kb on - strand, within AZOBR_RS14585 at 41.074 kb on + strand, within AZOBR_RS14585 at 41.173 kb on + strand, within AZOBR_RS14585 at 41.194 kb on + strand, within AZOBR_RS14585 at 41.194 kb on + strand, within AZOBR_RS14585 at 41.195 kb on - strand, within AZOBR_RS14585 at 41.389 kb on + strand at 41.429 kb on + strand at 41.523 kb on - strand at 41.530 kb on + strand at 41.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 39,029 + +0.3 39,029 + +0.4 39,029 + -0.6 39,030 - -2.7 39,030 - -1.2 39,031 + -2.2 39,032 - -2.8 39,032 - +1.7 39,593 + -0.5 39,593 + -0.4 39,594 - +1.3 39,594 - -0.4 39,673 + +1.0 39,759 + -0.0 39,759 + -0.3 39,759 + +0.4 39,760 - -0.0 39,895 - AZOBR_RS14580 0.21 -0.8 39,895 - AZOBR_RS14580 0.21 +0.9 40,344 + AZOBR_RS14580 0.59 -1.1 40,491 + AZOBR_RS14580 0.71 -2.6 40,743 + +0.3 40,909 + +0.4 40,910 - +0.3 40,942 + -0.0 40,943 - +0.1 40,979 - AZOBR_RS14585 0.18 +0.2 41,074 + AZOBR_RS14585 0.38 +0.2 41,173 + AZOBR_RS14585 0.58 -1.3 41,194 + AZOBR_RS14585 0.63 +0.2 41,194 + AZOBR_RS14585 0.63 -0.7 41,195 - AZOBR_RS14585 0.63 -3.4 41,389 + -0.3 41,429 + -1.7 41,523 - +1.3 41,530 + -0.0 41,531 - +1.0
Or see this region's nucleotide sequence