Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10940 and AZOBR_RS10945 are separated by 208 nucleotides AZOBR_RS10945 and AZOBR_RS10950 are separated by 15 nucleotides AZOBR_RS10950 and AZOBR_RS10955 are separated by 12 nucleotides
AZOBR_RS10940: AZOBR_RS10940 - 3-phosphoglycerate dehydrogenase, at 2,305,643 to 2,306,890
_RS10940
AZOBR_RS10945: AZOBR_RS10945 - arsenate reductase, at 2,307,099 to 2,307,440
_RS10945
AZOBR_RS10950: AZOBR_RS10950 - SAM-dependent methyltransferase, at 2,307,456 to 2,308,382
_RS10950
AZOBR_RS10955: AZOBR_RS10955 - GCN5 family acetyltransferase, at 2,308,395 to 2,308,985
_RS10955
Position (kb)
2307
2308 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2307.047 kb on + strand at 2307.048 kb on - strand at 2307.118 kb on - strand at 2307.199 kb on - strand, within AZOBR_RS10945 at 2307.199 kb on - strand, within AZOBR_RS10945 at 2307.438 kb on + strand at 2307.639 kb on + strand, within AZOBR_RS10950 at 2307.639 kb on + strand, within AZOBR_RS10950 at 2307.639 kb on + strand, within AZOBR_RS10950 at 2307.640 kb on - strand, within AZOBR_RS10950 at 2307.726 kb on + strand, within AZOBR_RS10950 at 2307.726 kb on + strand, within AZOBR_RS10950 at 2307.727 kb on - strand, within AZOBR_RS10950 at 2307.727 kb on - strand, within AZOBR_RS10950 at 2307.727 kb on - strand, within AZOBR_RS10950 at 2307.727 kb on - strand, within AZOBR_RS10950 at 2307.744 kb on + strand, within AZOBR_RS10950 at 2307.744 kb on + strand, within AZOBR_RS10950 at 2307.745 kb on - strand, within AZOBR_RS10950 at 2307.745 kb on - strand, within AZOBR_RS10950 at 2307.765 kb on + strand, within AZOBR_RS10950 at 2307.765 kb on + strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.766 kb on - strand, within AZOBR_RS10950 at 2307.798 kb on + strand, within AZOBR_RS10950 at 2307.798 kb on + strand, within AZOBR_RS10950 at 2307.799 kb on - strand, within AZOBR_RS10950 at 2308.074 kb on + strand, within AZOBR_RS10950 at 2308.074 kb on + strand, within AZOBR_RS10950 at 2308.075 kb on - strand, within AZOBR_RS10950 at 2308.101 kb on + strand, within AZOBR_RS10950 at 2308.102 kb on - strand, within AZOBR_RS10950
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 2,307,047 + +0.3 2,307,048 - +1.0 2,307,118 - +1.3 2,307,199 - AZOBR_RS10945 0.29 -1.5 2,307,199 - AZOBR_RS10945 0.29 -0.8 2,307,438 + -0.1 2,307,639 + AZOBR_RS10950 0.20 -0.6 2,307,639 + AZOBR_RS10950 0.20 -1.0 2,307,639 + AZOBR_RS10950 0.20 -0.8 2,307,640 - AZOBR_RS10950 0.20 +0.7 2,307,726 + AZOBR_RS10950 0.29 -0.1 2,307,726 + AZOBR_RS10950 0.29 -4.5 2,307,727 - AZOBR_RS10950 0.29 +0.0 2,307,727 - AZOBR_RS10950 0.29 +0.6 2,307,727 - AZOBR_RS10950 0.29 -0.2 2,307,727 - AZOBR_RS10950 0.29 -0.5 2,307,744 + AZOBR_RS10950 0.31 +0.5 2,307,744 + AZOBR_RS10950 0.31 -1.2 2,307,745 - AZOBR_RS10950 0.31 +0.7 2,307,745 - AZOBR_RS10950 0.31 -1.0 2,307,765 + AZOBR_RS10950 0.33 -0.6 2,307,765 + AZOBR_RS10950 0.33 -0.6 2,307,766 - AZOBR_RS10950 0.33 -0.6 2,307,766 - AZOBR_RS10950 0.33 +0.1 2,307,766 - AZOBR_RS10950 0.33 +0.1 2,307,766 - AZOBR_RS10950 0.33 -1.0 2,307,766 - AZOBR_RS10950 0.33 +0.4 2,307,766 - AZOBR_RS10950 0.33 -0.5 2,307,766 - AZOBR_RS10950 0.33 +1.1 2,307,798 + AZOBR_RS10950 0.37 -0.5 2,307,798 + AZOBR_RS10950 0.37 -1.8 2,307,799 - AZOBR_RS10950 0.37 -2.9 2,308,074 + AZOBR_RS10950 0.67 +0.2 2,308,074 + AZOBR_RS10950 0.67 +1.5 2,308,075 - AZOBR_RS10950 0.67 -0.6 2,308,101 + AZOBR_RS10950 0.70 +0.4 2,308,102 - AZOBR_RS10950 0.70 -0.9
Or see this region's nucleotide sequence