Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09505 and AZOBR_RS09510 are separated by 34 nucleotides AZOBR_RS09510 and AZOBR_RS09515 are separated by 123 nucleotides AZOBR_RS09515 and AZOBR_RS09520 are separated by 54 nucleotides
AZOBR_RS09505: AZOBR_RS09505 - DNA polymerase III epsilon subunit, at 1,989,476 to 1,990,789
_RS09505
AZOBR_RS09510: AZOBR_RS09510 - hypothetical protein, at 1,990,824 to 1,991,291
_RS09510
AZOBR_RS09515: AZOBR_RS09515 - heme ABC transporter ATP-binding protein, at 1,991,415 to 1,993,091
_RS09515
AZOBR_RS09520: AZOBR_RS09520 - hypothetical protein, at 1,993,146 to 1,994,627
_RS09520
Position (kb)
1991
1992
1993
1994 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1991.279 kb on - strand at 1991.279 kb on - strand at 1991.329 kb on - strand at 1991.329 kb on - strand at 1991.424 kb on + strand at 1991.430 kb on + strand at 1991.430 kb on + strand at 1991.430 kb on + strand at 1991.430 kb on + strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.431 kb on - strand at 1991.436 kb on + strand at 1991.437 kb on - strand at 1991.437 kb on - strand at 1991.437 kb on - strand at 1991.464 kb on - strand at 1991.552 kb on + strand at 1991.595 kb on + strand, within AZOBR_RS09515 at 1991.595 kb on + strand, within AZOBR_RS09515 at 1992.042 kb on + strand, within AZOBR_RS09515 at 1992.078 kb on + strand, within AZOBR_RS09515 at 1992.078 kb on + strand, within AZOBR_RS09515 at 1992.150 kb on + strand, within AZOBR_RS09515 at 1992.151 kb on - strand, within AZOBR_RS09515 at 1992.151 kb on - strand, within AZOBR_RS09515 at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.068 kb on + strand at 1993.211 kb on - strand at 1993.358 kb on - strand, within AZOBR_RS09520 at 1993.438 kb on + strand, within AZOBR_RS09520 at 1993.976 kb on - strand, within AZOBR_RS09520 at 1994.020 kb on + strand, within AZOBR_RS09520 at 1994.021 kb on - strand, within AZOBR_RS09520
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,991,279 - -0.0 1,991,279 - +0.5 1,991,329 - -0.8 1,991,329 - -2.5 1,991,424 + -1.1 1,991,430 + -0.2 1,991,430 + -1.2 1,991,430 + -2.2 1,991,430 + -2.2 1,991,431 - -0.0 1,991,431 - -0.3 1,991,431 - -1.9 1,991,431 - -4.0 1,991,431 - -1.2 1,991,436 + -1.2 1,991,437 - -3.0 1,991,437 - -2.4 1,991,437 - -0.8 1,991,464 - -1.7 1,991,552 + -0.6 1,991,595 + AZOBR_RS09515 0.11 -1.0 1,991,595 + AZOBR_RS09515 0.11 -1.3 1,992,042 + AZOBR_RS09515 0.37 -1.7 1,992,078 + AZOBR_RS09515 0.40 -3.2 1,992,078 + AZOBR_RS09515 0.40 -1.4 1,992,150 + AZOBR_RS09515 0.44 -1.1 1,992,151 - AZOBR_RS09515 0.44 -2.7 1,992,151 - AZOBR_RS09515 0.44 -0.3 1,993,068 + +1.0 1,993,068 + -0.8 1,993,068 + +1.6 1,993,068 + -0.4 1,993,211 - +0.8 1,993,358 - AZOBR_RS09520 0.14 -3.2 1,993,438 + AZOBR_RS09520 0.20 -1.2 1,993,976 - AZOBR_RS09520 0.56 -0.7 1,994,020 + AZOBR_RS09520 0.59 -0.7 1,994,021 - AZOBR_RS09520 0.59 -0.5
Or see this region's nucleotide sequence