Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06480 and AZOBR_RS06485 are separated by 6 nucleotides AZOBR_RS06485 and AZOBR_RS06490 are separated by 60 nucleotides AZOBR_RS06490 and AZOBR_RS06495 are separated by 80 nucleotides
AZOBR_RS06480: AZOBR_RS06480 - hypothetical protein, at 1,371,825 to 1,373,735
_RS06480
AZOBR_RS06485: AZOBR_RS06485 - membrane protein, at 1,373,742 to 1,374,146
_RS06485
AZOBR_RS06490: AZOBR_RS06490 - hypothetical protein, at 1,374,207 to 1,374,410
_RS06490
AZOBR_RS06495: AZOBR_RS06495 - ABC transporter substrate-binding protein, at 1,374,491 to 1,375,459
_RS06495
Position (kb) 1374
1375 Strain fitness (log2 ratio) -1
0
1 at 1373.535 kb on + strand, within AZOBR_RS06480 at 1373.536 kb on - strand, within AZOBR_RS06480 at 1373.536 kb on - strand, within AZOBR_RS06480 at 1374.019 kb on + strand, within AZOBR_RS06485 at 1374.020 kb on - strand, within AZOBR_RS06485 at 1374.152 kb on + strand at 1374.153 kb on - strand at 1374.153 kb on - strand at 1374.184 kb on + strand at 1374.185 kb on - strand at 1374.185 kb on - strand at 1374.657 kb on - strand, within AZOBR_RS06495 at 1374.983 kb on + strand, within AZOBR_RS06495 at 1374.984 kb on - strand, within AZOBR_RS06495 at 1375.136 kb on + strand, within AZOBR_RS06495
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,373,535 + AZOBR_RS06480 0.89 -0.2 1,373,536 - AZOBR_RS06480 0.90 -0.5 1,373,536 - AZOBR_RS06480 0.90 -0.1 1,374,019 + AZOBR_RS06485 0.68 +1.0 1,374,020 - AZOBR_RS06485 0.69 -0.0 1,374,152 + +0.5 1,374,153 - -0.7 1,374,153 - +1.0 1,374,184 + -0.1 1,374,185 - -0.7 1,374,185 - -0.5 1,374,657 - AZOBR_RS06495 0.17 +0.5 1,374,983 + AZOBR_RS06495 0.51 +0.2 1,374,984 - AZOBR_RS06495 0.51 +0.9 1,375,136 + AZOBR_RS06495 0.67 +0.0
Or see this region's nucleotide sequence