Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03145 and AZOBR_RS03150 are separated by 147 nucleotides AZOBR_RS03150 and AZOBR_RS03155 are separated by 131 nucleotides AZOBR_RS03155 and AZOBR_RS03160 are separated by 104 nucleotides
AZOBR_RS03145: AZOBR_RS03145 - diguanylate cyclase, at 670,143 to 671,018
_RS03145
AZOBR_RS03150: AZOBR_RS03150 - uracil phosphoribosyltransferase, at 671,166 to 671,816
_RS03150
AZOBR_RS03155: AZOBR_RS03155 - iron ABC transporter permease, at 671,948 to 673,672
_RS03155
AZOBR_RS03160: AZOBR_RS03160 - pirin, at 673,777 to 674,625
_RS03160
Position (kb) 671
672
673
674 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 670.959 kb on + strand at 671.308 kb on - strand, within AZOBR_RS03150 at 671.308 kb on - strand, within AZOBR_RS03150 at 671.887 kb on - strand at 671.940 kb on - strand at 672.336 kb on - strand, within AZOBR_RS03155 at 672.482 kb on + strand, within AZOBR_RS03155 at 672.488 kb on + strand, within AZOBR_RS03155 at 672.489 kb on - strand, within AZOBR_RS03155 at 672.547 kb on + strand, within AZOBR_RS03155 at 672.704 kb on + strand, within AZOBR_RS03155 at 672.704 kb on + strand, within AZOBR_RS03155 at 673.738 kb on + strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.912 kb on + strand, within AZOBR_RS03160 at 673.912 kb on + strand, within AZOBR_RS03160 at 673.940 kb on - strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 674.185 kb on + strand, within AZOBR_RS03160 at 674.186 kb on - strand, within AZOBR_RS03160 at 674.315 kb on - strand, within AZOBR_RS03160 at 674.596 kb on + strand at 674.597 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 670,959 + +1.0 671,308 - AZOBR_RS03150 0.22 -2.2 671,308 - AZOBR_RS03150 0.22 +0.9 671,887 - +0.2 671,940 - -2.0 672,336 - AZOBR_RS03155 0.22 +0.9 672,482 + AZOBR_RS03155 0.31 -1.8 672,488 + AZOBR_RS03155 0.31 -2.8 672,489 - AZOBR_RS03155 0.31 -0.7 672,547 + AZOBR_RS03155 0.35 -1.1 672,704 + AZOBR_RS03155 0.44 -1.2 672,704 + AZOBR_RS03155 0.44 -1.4 673,738 + -0.2 673,739 - +0.2 673,739 - -0.8 673,739 - +1.0 673,912 + AZOBR_RS03160 0.16 -0.8 673,912 + AZOBR_RS03160 0.16 -2.2 673,940 - AZOBR_RS03160 0.19 +0.3 673,990 + AZOBR_RS03160 0.25 -0.4 673,990 + AZOBR_RS03160 0.25 -1.9 673,990 + AZOBR_RS03160 0.25 +0.9 673,990 + AZOBR_RS03160 0.25 +0.2 673,990 + AZOBR_RS03160 0.25 +0.8 673,991 - AZOBR_RS03160 0.25 -0.3 673,991 - AZOBR_RS03160 0.25 -0.9 673,991 - AZOBR_RS03160 0.25 -0.3 673,991 - AZOBR_RS03160 0.25 +1.4 673,991 - AZOBR_RS03160 0.25 -0.1 674,185 + AZOBR_RS03160 0.48 +0.1 674,186 - AZOBR_RS03160 0.48 +0.5 674,315 - AZOBR_RS03160 0.63 -1.0 674,596 + -0.4 674,597 - -0.5
Or see this region's nucleotide sequence