Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29175 and AZOBR_RS29180 are separated by 344 nucleotides AZOBR_RS29180 and AZOBR_RS29185 are separated by 63 nucleotides
AZOBR_RS29175: AZOBR_RS29175 - IclR family transcriptional regulator, at 671,286 to 672,074
_RS29175
AZOBR_RS29180: AZOBR_RS29180 - CoA-transferase, at 672,419 to 673,660
_RS29180
AZOBR_RS29185: AZOBR_RS29185 - aldehyde dehydrogenase, at 673,724 to 675,160
_RS29185
Position (kb) 672
673
674 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 671.470 kb on + strand, within AZOBR_RS29175 at 671.471 kb on - strand, within AZOBR_RS29175 at 671.486 kb on - strand, within AZOBR_RS29175 at 671.486 kb on - strand, within AZOBR_RS29175 at 671.641 kb on + strand, within AZOBR_RS29175 at 671.885 kb on - strand, within AZOBR_RS29175 at 671.885 kb on - strand, within AZOBR_RS29175 at 671.885 kb on - strand, within AZOBR_RS29175 at 671.885 kb on - strand, within AZOBR_RS29175 at 671.914 kb on + strand, within AZOBR_RS29175 at 671.915 kb on - strand, within AZOBR_RS29175 at 671.915 kb on - strand, within AZOBR_RS29175 at 671.915 kb on - strand, within AZOBR_RS29175 at 671.915 kb on - strand, within AZOBR_RS29175 at 671.915 kb on - strand, within AZOBR_RS29175 at 672.095 kb on + strand at 672.227 kb on - strand at 672.615 kb on - strand, within AZOBR_RS29180 at 672.617 kb on + strand, within AZOBR_RS29180 at 672.617 kb on + strand, within AZOBR_RS29180 at 672.617 kb on + strand, within AZOBR_RS29180 at 672.618 kb on - strand, within AZOBR_RS29180 at 672.618 kb on - strand, within AZOBR_RS29180 at 672.618 kb on - strand, within AZOBR_RS29180 at 672.800 kb on + strand, within AZOBR_RS29180 at 672.801 kb on - strand, within AZOBR_RS29180 at 672.836 kb on + strand, within AZOBR_RS29180 at 672.836 kb on + strand, within AZOBR_RS29180 at 672.836 kb on + strand, within AZOBR_RS29180 at 672.854 kb on + strand, within AZOBR_RS29180 at 672.974 kb on + strand, within AZOBR_RS29180 at 672.974 kb on + strand, within AZOBR_RS29180 at 672.975 kb on - strand, within AZOBR_RS29180 at 673.532 kb on + strand, within AZOBR_RS29180 at 673.823 kb on + strand at 673.824 kb on - strand at 674.051 kb on + strand, within AZOBR_RS29185 at 674.204 kb on + strand, within AZOBR_RS29185 at 674.205 kb on - strand, within AZOBR_RS29185
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 671,470 + AZOBR_RS29175 0.23 +0.4 671,471 - AZOBR_RS29175 0.23 +1.0 671,486 - AZOBR_RS29175 0.25 -1.9 671,486 - AZOBR_RS29175 0.25 -1.6 671,641 + AZOBR_RS29175 0.45 -0.1 671,885 - AZOBR_RS29175 0.76 +1.0 671,885 - AZOBR_RS29175 0.76 +1.0 671,885 - AZOBR_RS29175 0.76 -0.0 671,885 - AZOBR_RS29175 0.76 -0.3 671,914 + AZOBR_RS29175 0.80 +0.4 671,915 - AZOBR_RS29175 0.80 -0.5 671,915 - AZOBR_RS29175 0.80 +0.2 671,915 - AZOBR_RS29175 0.80 +2.0 671,915 - AZOBR_RS29175 0.80 -2.7 671,915 - AZOBR_RS29175 0.80 -3.0 672,095 + -1.1 672,227 - +0.3 672,615 - AZOBR_RS29180 0.16 -0.7 672,617 + AZOBR_RS29180 0.16 +0.1 672,617 + AZOBR_RS29180 0.16 -0.7 672,617 + AZOBR_RS29180 0.16 -0.0 672,618 - AZOBR_RS29180 0.16 +0.7 672,618 - AZOBR_RS29180 0.16 +0.5 672,618 - AZOBR_RS29180 0.16 -1.6 672,800 + AZOBR_RS29180 0.31 +1.1 672,801 - AZOBR_RS29180 0.31 +0.7 672,836 + AZOBR_RS29180 0.34 +2.0 672,836 + AZOBR_RS29180 0.34 -2.9 672,836 + AZOBR_RS29180 0.34 -2.1 672,854 + AZOBR_RS29180 0.35 -0.0 672,974 + AZOBR_RS29180 0.45 +0.5 672,974 + AZOBR_RS29180 0.45 -0.3 672,975 - AZOBR_RS29180 0.45 -0.3 673,532 + AZOBR_RS29180 0.90 -0.3 673,823 + -0.6 673,824 - -1.4 674,051 + AZOBR_RS29185 0.23 -1.3 674,204 + AZOBR_RS29185 0.33 +2.2 674,205 - AZOBR_RS29185 0.33 -2.8
Or see this region's nucleotide sequence