Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26950 and AZOBR_RS26955 are separated by 30 nucleotides AZOBR_RS26955 and AZOBR_RS26960 are separated by 260 nucleotides AZOBR_RS26960 and AZOBR_RS26965 are separated by 523 nucleotides AZOBR_RS26965 and AZOBR_RS26970 are separated by 92 nucleotides
AZOBR_RS26950: AZOBR_RS26950 - membrane protein, at 192,967 to 193,626
_RS26950
AZOBR_RS26955: AZOBR_RS26955 - two-component response regulator, at 193,657 to 194,043
_RS26955
AZOBR_RS26960: AZOBR_RS26960 - hypothetical protein, at 194,304 to 196,016
_RS26960
AZOBR_RS26965: AZOBR_RS26965 - 30S ribosomal protein S21, at 196,540 to 196,743
_RS26965
AZOBR_RS26970: AZOBR_RS26970 - translation initiation factor IF-3, at 196,836 to 197,369
_RS26970
Position (kb) 194
195
196
197 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 194.106 kb on + strand at 194.107 kb on - strand at 194.186 kb on - strand at 194.186 kb on - strand at 194.421 kb on + strand at 194.568 kb on + strand, within AZOBR_RS26960 at 194.568 kb on + strand, within AZOBR_RS26960 at 194.568 kb on + strand, within AZOBR_RS26960 at 194.595 kb on - strand, within AZOBR_RS26960 at 194.638 kb on - strand, within AZOBR_RS26960 at 194.638 kb on - strand, within AZOBR_RS26960 at 194.694 kb on + strand, within AZOBR_RS26960 at 194.694 kb on + strand, within AZOBR_RS26960 at 194.695 kb on - strand, within AZOBR_RS26960 at 194.695 kb on - strand, within AZOBR_RS26960 at 194.882 kb on - strand, within AZOBR_RS26960 at 194.882 kb on - strand, within AZOBR_RS26960 at 195.342 kb on + strand, within AZOBR_RS26960 at 195.342 kb on + strand, within AZOBR_RS26960 at 195.342 kb on + strand, within AZOBR_RS26960 at 195.342 kb on + strand, within AZOBR_RS26960 at 195.342 kb on + strand, within AZOBR_RS26960 at 195.342 kb on + strand, within AZOBR_RS26960 at 195.343 kb on - strand, within AZOBR_RS26960 at 195.453 kb on + strand, within AZOBR_RS26960 at 195.454 kb on - strand, within AZOBR_RS26960 at 195.454 kb on - strand, within AZOBR_RS26960 at 195.567 kb on + strand, within AZOBR_RS26960 at 195.567 kb on + strand, within AZOBR_RS26960 at 195.567 kb on + strand, within AZOBR_RS26960 at 195.567 kb on + strand, within AZOBR_RS26960 at 195.567 kb on + strand, within AZOBR_RS26960 at 195.568 kb on - strand, within AZOBR_RS26960 at 196.282 kb on + strand at 196.282 kb on + strand at 196.282 kb on + strand at 196.282 kb on + strand at 196.283 kb on - strand at 196.283 kb on - strand at 196.283 kb on - strand at 196.283 kb on - strand at 196.837 kb on + strand at 196.842 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 194,106 + -0.9 194,107 - +0.7 194,186 - +1.7 194,186 - +0.0 194,421 + -2.0 194,568 + AZOBR_RS26960 0.15 +0.4 194,568 + AZOBR_RS26960 0.15 +2.7 194,568 + AZOBR_RS26960 0.15 -0.2 194,595 - AZOBR_RS26960 0.17 +1.0 194,638 - AZOBR_RS26960 0.19 +1.2 194,638 - AZOBR_RS26960 0.19 -0.4 194,694 + AZOBR_RS26960 0.23 -0.2 194,694 + AZOBR_RS26960 0.23 +2.0 194,695 - AZOBR_RS26960 0.23 -0.9 194,695 - AZOBR_RS26960 0.23 +1.0 194,882 - AZOBR_RS26960 0.34 +1.1 194,882 - AZOBR_RS26960 0.34 -1.7 195,342 + AZOBR_RS26960 0.61 -0.0 195,342 + AZOBR_RS26960 0.61 -0.5 195,342 + AZOBR_RS26960 0.61 -0.6 195,342 + AZOBR_RS26960 0.61 -1.2 195,342 + AZOBR_RS26960 0.61 -1.6 195,342 + AZOBR_RS26960 0.61 -0.6 195,343 - AZOBR_RS26960 0.61 +0.4 195,453 + AZOBR_RS26960 0.67 +0.5 195,454 - AZOBR_RS26960 0.67 +0.4 195,454 - AZOBR_RS26960 0.67 +0.6 195,567 + AZOBR_RS26960 0.74 -3.1 195,567 + AZOBR_RS26960 0.74 -3.2 195,567 + AZOBR_RS26960 0.74 +2.0 195,567 + AZOBR_RS26960 0.74 -1.5 195,567 + AZOBR_RS26960 0.74 +0.7 195,568 - AZOBR_RS26960 0.74 -2.2 196,282 + -0.4 196,282 + +1.7 196,282 + -0.4 196,282 + +0.5 196,283 - +2.3 196,283 - +0.6 196,283 - -2.0 196,283 - +0.4 196,837 + -2.4 196,842 - +1.0
Or see this region's nucleotide sequence