Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26390 and AZOBR_RS26395 are separated by 90 nucleotides AZOBR_RS26395 and AZOBR_RS26400 are separated by 35 nucleotides AZOBR_RS26400 and AZOBR_RS26405 are separated by 81 nucleotides AZOBR_RS26405 and AZOBR_RS26410 overlap by 14 nucleotides
AZOBR_RS26390: AZOBR_RS26390 - deacylase, at 67,317 to 68,363
_RS26390
AZOBR_RS26395: AZOBR_RS26395 - endoribonuclease, at 68,454 to 68,798
_RS26395
AZOBR_RS26400: AZOBR_RS26400 - ABC transporter substrate-binding protein, at 68,834 to 69,637
_RS26400
AZOBR_RS26405: AZOBR_RS26405 - amino acid ABC transporter ATP-binding protein, at 69,719 to 70,447
_RS26405
AZOBR_RS26410: AZOBR_RS26410 - amino acid ABC transporter permease, at 70,434 to 71,084
_RS26410
Position (kb) 68
69
70 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 68.182 kb on + strand, within AZOBR_RS26390 at 68.266 kb on + strand at 68.267 kb on - strand at 68.267 kb on - strand at 68.267 kb on - strand at 68.393 kb on + strand at 68.443 kb on + strand at 68.443 kb on + strand at 68.444 kb on - strand at 68.560 kb on + strand, within AZOBR_RS26395 at 68.560 kb on + strand, within AZOBR_RS26395 at 68.835 kb on + strand at 68.835 kb on + strand at 68.910 kb on + strand at 68.998 kb on + strand, within AZOBR_RS26400 at 68.998 kb on + strand, within AZOBR_RS26400 at 68.999 kb on - strand, within AZOBR_RS26400 at 68.999 kb on - strand, within AZOBR_RS26400 at 69.088 kb on - strand, within AZOBR_RS26400 at 69.247 kb on - strand, within AZOBR_RS26400 at 69.247 kb on - strand, within AZOBR_RS26400 at 69.271 kb on - strand, within AZOBR_RS26400 at 69.271 kb on - strand, within AZOBR_RS26400 at 70.410 kb on + strand at 70.410 kb on + strand at 70.411 kb on - strand at 70.504 kb on + strand, within AZOBR_RS26410 at 70.505 kb on - strand, within AZOBR_RS26410 at 70.505 kb on - strand, within AZOBR_RS26410
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 68,182 + AZOBR_RS26390 0.83 +1.7 68,266 + -2.0 68,267 - -0.6 68,267 - +0.4 68,267 - +0.0 68,393 + +1.3 68,443 + -0.0 68,443 + -2.2 68,444 - -2.6 68,560 + AZOBR_RS26395 0.31 +0.0 68,560 + AZOBR_RS26395 0.31 +0.5 68,835 + -1.6 68,835 + +0.4 68,910 + -1.9 68,998 + AZOBR_RS26400 0.20 -0.4 68,998 + AZOBR_RS26400 0.20 -0.7 68,999 - AZOBR_RS26400 0.21 -2.1 68,999 - AZOBR_RS26400 0.21 +0.4 69,088 - AZOBR_RS26400 0.32 -0.1 69,247 - AZOBR_RS26400 0.51 +1.1 69,247 - AZOBR_RS26400 0.51 -1.3 69,271 - AZOBR_RS26400 0.54 -0.5 69,271 - AZOBR_RS26400 0.54 -2.9 70,410 + -2.7 70,410 + -2.5 70,411 - +1.4 70,504 + AZOBR_RS26410 0.11 +0.8 70,505 - AZOBR_RS26410 0.11 -0.3 70,505 - AZOBR_RS26410 0.11 -2.0
Or see this region's nucleotide sequence