Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS26115

Experiment: 2-pentyl-furan 1.780666667 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS29630 and AZOBR_RS26115 are separated by 132 nucleotides AZOBR_RS29630: AZOBR_RS29630 - amidase hydantoinase/carbamoylase family, at 776,909 to 778,102 _RS29630 AZOBR_RS26115: AZOBR_RS26115 - hypothetical protein, at 778,235 to 778,804 _RS26115 Position (kb) 778 779Strain fitness (log2 ratio) -2 -1 0 1 2at 777.590 kb on + strand, within AZOBR_RS29630at 778.154 kb on - strandat 778.652 kb on + strand, within AZOBR_RS26115at 778.652 kb on + strand, within AZOBR_RS26115at 778.653 kb on - strand, within AZOBR_RS26115at 778.653 kb on - strand, within AZOBR_RS26115at 778.653 kb on - strand, within AZOBR_RS26115at 778.653 kb on - strand, within AZOBR_RS26115

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM
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777,590 + AZOBR_RS29630 0.57 -2.7
778,154 - -0.0
778,652 + AZOBR_RS26115 0.73 -0.3
778,652 + AZOBR_RS26115 0.73 -0.0
778,653 - AZOBR_RS26115 0.73 +2.0
778,653 - AZOBR_RS26115 0.73 +0.4
778,653 - AZOBR_RS26115 0.73 +1.0
778,653 - AZOBR_RS26115 0.73 -0.3

Or see this region's nucleotide sequence