Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25655 and AZOBR_RS25660 are separated by 348 nucleotides AZOBR_RS25660 and AZOBR_RS25665 are separated by 175 nucleotides AZOBR_RS25665 and AZOBR_RS25670 are separated by 3 nucleotides
AZOBR_RS25655: AZOBR_RS25655 - oxidoreductase, at 802,961 to 804,241
_RS25655
AZOBR_RS25660: AZOBR_RS25660 - amidohydrolase, at 804,590 to 805,762
_RS25660
AZOBR_RS25665: AZOBR_RS25665 - hypothetical protein, at 805,938 to 806,531
_RS25665
AZOBR_RS25670: AZOBR_RS25670 - long-chain fatty acid--CoA ligase, at 806,535 to 809,945
_RS25670
Position (kb) 804
805
806 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 803.731 kb on - strand, within AZOBR_RS25655 at 803.731 kb on - strand, within AZOBR_RS25655 at 803.733 kb on + strand, within AZOBR_RS25655 at 803.734 kb on - strand, within AZOBR_RS25655 at 804.343 kb on + strand at 804.356 kb on - strand at 804.422 kb on + strand at 804.422 kb on + strand at 804.524 kb on + strand at 804.524 kb on + strand at 804.525 kb on - strand at 804.525 kb on - strand at 804.525 kb on - strand at 804.634 kb on - strand at 804.634 kb on - strand at 804.672 kb on + strand at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.891 kb on + strand, within AZOBR_RS25660 at 805.036 kb on + strand, within AZOBR_RS25660 at 805.215 kb on + strand, within AZOBR_RS25660 at 805.216 kb on - strand, within AZOBR_RS25660 at 805.288 kb on - strand, within AZOBR_RS25660 at 805.288 kb on - strand, within AZOBR_RS25660 at 806.073 kb on + strand, within AZOBR_RS25665 at 806.127 kb on + strand, within AZOBR_RS25665 at 806.128 kb on - strand, within AZOBR_RS25665 at 806.128 kb on - strand, within AZOBR_RS25665 at 806.649 kb on + strand at 806.650 kb on - strand at 806.650 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 803,731 - AZOBR_RS25655 0.60 +0.8 803,731 - AZOBR_RS25655 0.60 +1.6 803,733 + AZOBR_RS25655 0.60 +0.2 803,734 - AZOBR_RS25655 0.60 +1.0 804,343 + +1.2 804,356 - +1.2 804,422 + -1.6 804,422 + -0.3 804,524 + +0.0 804,524 + +0.6 804,525 - +0.2 804,525 - -3.0 804,525 - -0.4 804,634 - -0.7 804,634 - -1.8 804,672 + +0.5 804,729 + AZOBR_RS25660 0.12 -1.0 804,729 + AZOBR_RS25660 0.12 -0.9 804,729 + AZOBR_RS25660 0.12 -0.7 804,729 + AZOBR_RS25660 0.12 +0.5 804,729 + AZOBR_RS25660 0.12 -0.9 804,729 + AZOBR_RS25660 0.12 -0.5 804,891 + AZOBR_RS25660 0.26 -3.6 805,036 + AZOBR_RS25660 0.38 -1.4 805,215 + AZOBR_RS25660 0.53 +2.5 805,216 - AZOBR_RS25660 0.53 +1.0 805,288 - AZOBR_RS25660 0.60 +0.5 805,288 - AZOBR_RS25660 0.60 +0.5 806,073 + AZOBR_RS25665 0.23 -0.1 806,127 + AZOBR_RS25665 0.32 -0.5 806,128 - AZOBR_RS25665 0.32 +0.1 806,128 - AZOBR_RS25665 0.32 -2.6 806,649 + +1.1 806,650 - +0.6 806,650 - +0.1
Or see this region's nucleotide sequence