Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21035 and AZOBR_RS21040 are separated by 55 nucleotides AZOBR_RS21040 and AZOBR_RS21045 are separated by 26 nucleotides AZOBR_RS21045 and AZOBR_RS21050 are separated by 3 nucleotides
AZOBR_RS21035: AZOBR_RS21035 - gamma-glutamyltransferase, at 1,478,878 to 1,480,422
_RS21035
AZOBR_RS21040: AZOBR_RS21040 - hypothetical protein, at 1,480,478 to 1,481,515
_RS21040
AZOBR_RS21045: AZOBR_RS21045 - ABC transporter permease, at 1,481,542 to 1,482,315
_RS21045
AZOBR_RS21050: AZOBR_RS21050 - nitrate ABC transporter ATP-binding protein, at 1,482,319 to 1,483,161
_RS21050
Position (kb) 1480
1481
1482 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1479.848 kb on + strand, within AZOBR_RS21035 at 1479.848 kb on + strand, within AZOBR_RS21035 at 1479.849 kb on - strand, within AZOBR_RS21035 at 1480.016 kb on + strand at 1480.017 kb on - strand, within AZOBR_RS21035 at 1480.095 kb on - strand, within AZOBR_RS21035 at 1480.491 kb on + strand at 1480.491 kb on + strand at 1480.672 kb on - strand, within AZOBR_RS21040 at 1480.899 kb on + strand, within AZOBR_RS21040 at 1480.899 kb on + strand, within AZOBR_RS21040 at 1480.900 kb on - strand, within AZOBR_RS21040 at 1481.196 kb on + strand, within AZOBR_RS21040 at 1481.358 kb on + strand, within AZOBR_RS21040 at 1481.615 kb on + strand at 1481.615 kb on + strand at 1481.616 kb on - strand at 1481.616 kb on - strand at 1481.616 kb on - strand at 1481.616 kb on - strand at 1482.038 kb on + strand, within AZOBR_RS21045 at 1482.039 kb on - strand at 1482.039 kb on - strand, within AZOBR_RS21045 at 1482.039 kb on - strand, within AZOBR_RS21045 at 1482.039 kb on - strand, within AZOBR_RS21045 at 1482.039 kb on - strand, within AZOBR_RS21045 at 1482.050 kb on + strand, within AZOBR_RS21045 at 1482.100 kb on - strand, within AZOBR_RS21045 at 1482.308 kb on + strand at 1482.309 kb on - strand at 1482.309 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,479,848 + AZOBR_RS21035 0.63 -0.6 1,479,848 + AZOBR_RS21035 0.63 +0.1 1,479,849 - AZOBR_RS21035 0.63 +1.0 1,480,016 + -0.3 1,480,017 - AZOBR_RS21035 0.74 +0.3 1,480,095 - AZOBR_RS21035 0.79 -1.6 1,480,491 + +0.9 1,480,491 + +0.6 1,480,672 - AZOBR_RS21040 0.19 +0.9 1,480,899 + AZOBR_RS21040 0.41 -0.2 1,480,899 + AZOBR_RS21040 0.41 +0.0 1,480,900 - AZOBR_RS21040 0.41 -2.2 1,481,196 + AZOBR_RS21040 0.69 -0.9 1,481,358 + AZOBR_RS21040 0.85 +0.1 1,481,615 + +0.1 1,481,615 + -0.5 1,481,616 - -0.3 1,481,616 - -0.0 1,481,616 - -3.4 1,481,616 - -1.7 1,482,038 + AZOBR_RS21045 0.64 +1.4 1,482,039 - +0.5 1,482,039 - AZOBR_RS21045 0.64 +1.4 1,482,039 - AZOBR_RS21045 0.64 -2.7 1,482,039 - AZOBR_RS21045 0.64 +1.8 1,482,039 - AZOBR_RS21045 0.64 -1.5 1,482,050 + AZOBR_RS21045 0.66 -2.2 1,482,100 - AZOBR_RS21045 0.72 +0.3 1,482,308 + +0.1 1,482,309 - -1.3 1,482,309 - +0.1
Or see this region's nucleotide sequence