Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20315 and AZOBR_RS20320 are separated by 202 nucleotides AZOBR_RS20320 and AZOBR_RS20325 are separated by 317 nucleotides
AZOBR_RS20315: AZOBR_RS20315 - cold-shock protein, at 1,326,914 to 1,327,492
_RS20315
AZOBR_RS20320: AZOBR_RS20320 - carboxyl-terminal protease, at 1,327,695 to 1,329,143
_RS20320
AZOBR_RS20325: AZOBR_RS20325 - UDP-phosphate galactose phosphotransferase, at 1,329,461 to 1,330,063
_RS20325
Position (kb)
1327
1328
1329
1330 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1326.747 kb on - strand at 1327.590 kb on - strand at 1328.026 kb on - strand, within AZOBR_RS20320 at 1328.177 kb on + strand, within AZOBR_RS20320 at 1328.179 kb on + strand, within AZOBR_RS20320 at 1328.401 kb on + strand, within AZOBR_RS20320 at 1328.402 kb on - strand at 1328.402 kb on - strand, within AZOBR_RS20320 at 1328.402 kb on - strand, within AZOBR_RS20320 at 1328.758 kb on + strand, within AZOBR_RS20320 at 1328.792 kb on - strand, within AZOBR_RS20320 at 1328.974 kb on + strand, within AZOBR_RS20320 at 1328.975 kb on - strand, within AZOBR_RS20320 at 1328.975 kb on - strand, within AZOBR_RS20320 at 1329.211 kb on - strand at 1329.211 kb on - strand at 1329.211 kb on - strand at 1329.319 kb on + strand at 1329.319 kb on + strand at 1329.319 kb on + strand at 1329.320 kb on - strand at 1329.387 kb on + strand at 1329.387 kb on + strand at 1329.387 kb on + strand at 1329.387 kb on + strand at 1329.388 kb on - strand at 1329.392 kb on + strand at 1329.392 kb on + strand at 1329.392 kb on + strand at 1329.392 kb on + strand at 1329.392 kb on + strand at 1329.392 kb on + strand at 1329.393 kb on - strand at 1329.393 kb on - strand at 1329.393 kb on - strand at 1329.393 kb on - strand at 1329.393 kb on - strand at 1329.393 kb on - strand at 1329.393 kb on - strand at 1329.455 kb on + strand at 1329.456 kb on - strand at 1329.466 kb on - strand at 1329.466 kb on - strand at 1329.466 kb on - strand at 1329.546 kb on + strand, within AZOBR_RS20325 at 1329.546 kb on + strand, within AZOBR_RS20325 at 1329.547 kb on - strand, within AZOBR_RS20325 at 1329.547 kb on - strand, within AZOBR_RS20325 at 1329.576 kb on + strand, within AZOBR_RS20325 at 1329.639 kb on + strand, within AZOBR_RS20325 at 1329.640 kb on - strand, within AZOBR_RS20325
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,326,747 - +0.0 1,327,590 - -0.6 1,328,026 - AZOBR_RS20320 0.23 -0.1 1,328,177 + AZOBR_RS20320 0.33 -0.5 1,328,179 + AZOBR_RS20320 0.33 +0.6 1,328,401 + AZOBR_RS20320 0.49 +0.4 1,328,402 - +0.6 1,328,402 - AZOBR_RS20320 0.49 -0.6 1,328,402 - AZOBR_RS20320 0.49 +0.6 1,328,758 + AZOBR_RS20320 0.73 -0.2 1,328,792 - AZOBR_RS20320 0.76 -0.2 1,328,974 + AZOBR_RS20320 0.88 +1.8 1,328,975 - AZOBR_RS20320 0.88 -0.1 1,328,975 - AZOBR_RS20320 0.88 +1.3 1,329,211 - +1.3 1,329,211 - +0.1 1,329,211 - +1.8 1,329,319 + +1.5 1,329,319 + -2.8 1,329,319 + +0.4 1,329,320 - +0.7 1,329,387 + -0.2 1,329,387 + +0.1 1,329,387 + +0.5 1,329,387 + -2.0 1,329,388 - -2.9 1,329,392 + +1.0 1,329,392 + +0.5 1,329,392 + +0.5 1,329,392 + +0.1 1,329,392 + -2.9 1,329,392 + -0.6 1,329,393 - +1.1 1,329,393 - +1.0 1,329,393 - -0.4 1,329,393 - -0.3 1,329,393 - +0.0 1,329,393 - +0.5 1,329,393 - -0.0 1,329,455 + -0.6 1,329,456 - +0.1 1,329,466 - +1.0 1,329,466 - -0.1 1,329,466 - -0.2 1,329,546 + AZOBR_RS20325 0.14 +0.6 1,329,546 + AZOBR_RS20325 0.14 -2.4 1,329,547 - AZOBR_RS20325 0.14 +1.3 1,329,547 - AZOBR_RS20325 0.14 +0.5 1,329,576 + AZOBR_RS20325 0.19 +0.0 1,329,639 + AZOBR_RS20325 0.30 +0.5 1,329,640 - AZOBR_RS20325 0.30 -1.9
Or see this region's nucleotide sequence