Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16740 and AZOBR_RS16745 are separated by 10 nucleotides AZOBR_RS16745 and AZOBR_RS16750 are separated by 73 nucleotides AZOBR_RS16750 and AZOBR_RS16755 are separated by 126 nucleotides AZOBR_RS16755 and AZOBR_RS16760 are separated by 29 nucleotides
AZOBR_RS16740: AZOBR_RS16740 - cob(II)yrinic acid a c-diamide reductase, at 512,797 to 513,456
_RS16740
AZOBR_RS16745: AZOBR_RS16745 - oxidoreductase, at 513,467 to 514,180
_RS16745
AZOBR_RS16750: AZOBR_RS16750 - TetR family transcriptional regulator, at 514,254 to 514,853
_RS16750
AZOBR_RS16755: AZOBR_RS16755 - alkylhydroperoxidase, at 514,980 to 515,429
_RS16755
AZOBR_RS16760: AZOBR_RS16760 - GntR family transcriptional regulator, at 515,459 to 516,904
_RS16760
Position (kb) 514
515 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 513.335 kb on - strand, within AZOBR_RS16740 at 513.454 kb on + strand at 513.455 kb on - strand at 513.849 kb on + strand, within AZOBR_RS16745 at 513.977 kb on - strand, within AZOBR_RS16745 at 513.977 kb on - strand, within AZOBR_RS16745 at 514.071 kb on + strand, within AZOBR_RS16745 at 514.071 kb on + strand, within AZOBR_RS16745 at 514.072 kb on - strand, within AZOBR_RS16745 at 514.353 kb on + strand, within AZOBR_RS16750 at 514.354 kb on - strand, within AZOBR_RS16750 at 514.414 kb on - strand, within AZOBR_RS16750 at 514.563 kb on + strand, within AZOBR_RS16750 at 515.049 kb on + strand, within AZOBR_RS16755 at 515.050 kb on - strand, within AZOBR_RS16755 at 515.050 kb on - strand, within AZOBR_RS16755 at 515.050 kb on - strand, within AZOBR_RS16755 at 515.050 kb on - strand, within AZOBR_RS16755 at 515.094 kb on + strand, within AZOBR_RS16755 at 515.095 kb on - strand, within AZOBR_RS16755 at 515.127 kb on + strand, within AZOBR_RS16755 at 515.379 kb on + strand, within AZOBR_RS16755 at 515.379 kb on + strand, within AZOBR_RS16755 at 515.580 kb on + strand at 515.581 kb on - strand at 515.766 kb on + strand, within AZOBR_RS16760 at 515.767 kb on - strand, within AZOBR_RS16760 at 515.800 kb on - strand, within AZOBR_RS16760
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 513,335 - AZOBR_RS16740 0.82 -0.5 513,454 + -4.0 513,455 - +0.9 513,849 + AZOBR_RS16745 0.54 -0.8 513,977 - AZOBR_RS16745 0.71 -2.3 513,977 - AZOBR_RS16745 0.71 -0.1 514,071 + AZOBR_RS16745 0.85 -0.5 514,071 + AZOBR_RS16745 0.85 -2.5 514,072 - AZOBR_RS16745 0.85 +0.0 514,353 + AZOBR_RS16750 0.17 -1.1 514,354 - AZOBR_RS16750 0.17 -2.3 514,414 - AZOBR_RS16750 0.27 -2.6 514,563 + AZOBR_RS16750 0.52 +1.0 515,049 + AZOBR_RS16755 0.15 +0.2 515,050 - AZOBR_RS16755 0.16 -1.2 515,050 - AZOBR_RS16755 0.16 +0.8 515,050 - AZOBR_RS16755 0.16 +0.1 515,050 - AZOBR_RS16755 0.16 -2.8 515,094 + AZOBR_RS16755 0.25 -2.3 515,095 - AZOBR_RS16755 0.26 +0.4 515,127 + AZOBR_RS16755 0.33 +0.2 515,379 + AZOBR_RS16755 0.89 +0.2 515,379 + AZOBR_RS16755 0.89 -2.7 515,580 + -0.2 515,581 - +0.4 515,766 + AZOBR_RS16760 0.21 -2.3 515,767 - AZOBR_RS16760 0.21 -0.0 515,800 - AZOBR_RS16760 0.24 -1.5
Or see this region's nucleotide sequence