Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15770 and AZOBR_RS15775 are separated by 170 nucleotides AZOBR_RS15775 and AZOBR_RS15780 are separated by 104 nucleotides
AZOBR_RS15770: AZOBR_RS15770 - osmoprotectant uptake system substrate-binding protein, at 288,671 to 289,591
_RS15770
AZOBR_RS15775: AZOBR_RS15775 - ferrochelatase, at 289,762 to 290,811
_RS15775
AZOBR_RS15780: AZOBR_RS15780 - transcriptional regulator, at 290,916 to 291,557
_RS15780
Position (kb) 289
290
291 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 288.861 kb on + strand, within AZOBR_RS15770 at 288.861 kb on + strand, within AZOBR_RS15770 at 288.862 kb on - strand, within AZOBR_RS15770 at 289.045 kb on - strand, within AZOBR_RS15770 at 289.275 kb on + strand, within AZOBR_RS15770 at 289.344 kb on + strand, within AZOBR_RS15770 at 290.828 kb on + strand at 290.828 kb on + strand at 290.828 kb on + strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.831 kb on + strand at 290.868 kb on + strand at 290.868 kb on + strand at 290.868 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.918 kb on - strand at 290.918 kb on - strand at 290.918 kb on - strand at 290.918 kb on - strand at 290.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 288,861 + AZOBR_RS15770 0.21 +1.4 288,861 + AZOBR_RS15770 0.21 -1.7 288,862 - AZOBR_RS15770 0.21 -0.2 289,045 - AZOBR_RS15770 0.41 -0.0 289,275 + AZOBR_RS15770 0.66 -0.7 289,344 + AZOBR_RS15770 0.73 +1.0 290,828 + -1.8 290,828 + -0.3 290,828 + +0.4 290,829 - +2.2 290,829 - +0.4 290,829 - -2.7 290,829 - -0.1 290,829 - +0.3 290,831 + +0.6 290,868 + -0.4 290,868 + -0.5 290,868 + -1.3 290,917 + +0.3 290,917 + -0.9 290,917 + -0.0 290,917 + +0.5 290,917 + -4.4 290,918 - -0.6 290,918 - +1.0 290,918 - -0.0 290,918 - -2.3 290,918 - +0.8
Or see this region's nucleotide sequence