Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03410 and AZOBR_RS03415 are separated by 71 nucleotides AZOBR_RS03415 and AZOBR_RS03420 are separated by 14 nucleotides AZOBR_RS03420 and AZOBR_RS03425 are separated by 109 nucleotides AZOBR_RS03425 and AZOBR_RS03430 are separated by 10 nucleotides
AZOBR_RS03410: AZOBR_RS03410 - multidrug DMT transporter permease, at 723,816 to 724,790
_RS03410
AZOBR_RS03415: AZOBR_RS03415 - chemotaxis protein CheY, at 724,862 to 725,446
_RS03415
AZOBR_RS03420: AZOBR_RS03420 - histidine kinase, at 725,461 to 726,801
_RS03420
AZOBR_RS03425: AZOBR_RS03425 - ABC transporter, at 726,911 to 727,711
_RS03425
AZOBR_RS03430: AZOBR_RS03430 - ABC transporter, at 727,722 to 728,534
_RS03430
Position (kb) 725
726
727 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 724.650 kb on + strand, within AZOBR_RS03410 at 724.650 kb on + strand, within AZOBR_RS03410 at 724.788 kb on + strand at 725.091 kb on + strand, within AZOBR_RS03415 at 725.092 kb on - strand, within AZOBR_RS03415 at 725.462 kb on + strand at 725.463 kb on - strand at 725.476 kb on + strand at 725.498 kb on - strand at 725.533 kb on - strand at 725.540 kb on - strand at 725.627 kb on + strand, within AZOBR_RS03420 at 725.627 kb on + strand, within AZOBR_RS03420 at 725.628 kb on - strand, within AZOBR_RS03420 at 725.664 kb on - strand, within AZOBR_RS03420 at 726.215 kb on + strand, within AZOBR_RS03420 at 726.215 kb on + strand, within AZOBR_RS03420 at 726.215 kb on + strand, within AZOBR_RS03420 at 726.270 kb on - strand, within AZOBR_RS03420 at 726.270 kb on - strand, within AZOBR_RS03420 at 726.458 kb on + strand, within AZOBR_RS03420 at 726.458 kb on + strand, within AZOBR_RS03420 at 726.458 kb on + strand, within AZOBR_RS03420 at 726.459 kb on - strand, within AZOBR_RS03420 at 726.488 kb on + strand, within AZOBR_RS03420 at 726.497 kb on + strand, within AZOBR_RS03420 at 726.911 kb on - strand at 726.911 kb on - strand at 727.193 kb on + strand, within AZOBR_RS03425 at 727.194 kb on - strand, within AZOBR_RS03425 at 727.194 kb on - strand, within AZOBR_RS03425 at 727.194 kb on - strand, within AZOBR_RS03425 at 727.242 kb on - strand, within AZOBR_RS03425 at 727.242 kb on - strand, within AZOBR_RS03425 at 727.253 kb on + strand, within AZOBR_RS03425 at 727.254 kb on - strand, within AZOBR_RS03425 at 727.254 kb on - strand, within AZOBR_RS03425 at 727.463 kb on + strand, within AZOBR_RS03425 at 727.463 kb on + strand, within AZOBR_RS03425 at 727.463 kb on + strand, within AZOBR_RS03425 at 727.779 kb on + strand at 727.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 724,650 + AZOBR_RS03410 0.86 -0.9 724,650 + AZOBR_RS03410 0.86 -0.1 724,788 + -0.0 725,091 + AZOBR_RS03415 0.39 -0.6 725,092 - AZOBR_RS03415 0.39 -0.8 725,462 + +1.1 725,463 - -0.3 725,476 + +0.5 725,498 - -1.6 725,533 - +0.2 725,540 - -0.9 725,627 + AZOBR_RS03420 0.12 -1.1 725,627 + AZOBR_RS03420 0.12 -0.3 725,628 - AZOBR_RS03420 0.12 +0.8 725,664 - AZOBR_RS03420 0.15 -2.3 726,215 + AZOBR_RS03420 0.56 -0.3 726,215 + AZOBR_RS03420 0.56 -2.2 726,215 + AZOBR_RS03420 0.56 -0.1 726,270 - AZOBR_RS03420 0.60 -0.4 726,270 - AZOBR_RS03420 0.60 +0.1 726,458 + AZOBR_RS03420 0.74 +0.2 726,458 + AZOBR_RS03420 0.74 +0.3 726,458 + AZOBR_RS03420 0.74 -2.1 726,459 - AZOBR_RS03420 0.74 -0.9 726,488 + AZOBR_RS03420 0.77 -0.5 726,497 + AZOBR_RS03420 0.77 +0.1 726,911 - -1.3 726,911 - +0.6 727,193 + AZOBR_RS03425 0.35 -2.3 727,194 - AZOBR_RS03425 0.35 -0.2 727,194 - AZOBR_RS03425 0.35 +0.2 727,194 - AZOBR_RS03425 0.35 +0.3 727,242 - AZOBR_RS03425 0.41 -1.4 727,242 - AZOBR_RS03425 0.41 -2.3 727,253 + AZOBR_RS03425 0.43 -0.0 727,254 - AZOBR_RS03425 0.43 -3.5 727,254 - AZOBR_RS03425 0.43 +1.5 727,463 + AZOBR_RS03425 0.69 +0.9 727,463 + AZOBR_RS03425 0.69 +0.3 727,463 + AZOBR_RS03425 0.69 +0.6 727,779 + -0.7 727,786 - +0.5
Or see this region's nucleotide sequence