Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02100 and AZOBR_RS02105 are separated by 681 nucleotides AZOBR_RS02105 and AZOBR_RS02110 are separated by 22 nucleotides
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
AZOBR_RS02105: AZOBR_RS02105 - hypothetical protein, at 432,122 to 432,700
_RS02105
AZOBR_RS02110: AZOBR_RS02110 - protein-PII uridylyltransferase, at 432,723 to 435,524
_RS02110
Position (kb) 432
433 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 431.127 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.305 kb on - strand, within AZOBR_RS02100 at 431.440 kb on + strand at 431.440 kb on + strand at 431.441 kb on - strand at 431.441 kb on - strand at 431.516 kb on + strand at 431.516 kb on + strand at 431.527 kb on + strand at 431.528 kb on - strand at 431.542 kb on - strand at 431.549 kb on - strand at 431.549 kb on - strand at 431.659 kb on + strand at 431.659 kb on + strand at 431.660 kb on - strand at 431.832 kb on + strand at 431.833 kb on + strand at 431.833 kb on - strand at 431.837 kb on - strand at 431.837 kb on - strand at 431.932 kb on + strand at 432.074 kb on - strand at 432.617 kb on + strand, within AZOBR_RS02105 at 432.702 kb on - strand at 432.702 kb on - strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.910 kb on + strand at 433.408 kb on + strand, within AZOBR_RS02110 at 433.409 kb on - strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.559 kb on - strand, within AZOBR_RS02110
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 431,127 + AZOBR_RS02100 0.66 -0.4 431,304 + AZOBR_RS02100 0.85 -0.2 431,304 + AZOBR_RS02100 0.85 -1.1 431,304 + AZOBR_RS02100 0.85 -0.5 431,304 + AZOBR_RS02100 0.85 +0.8 431,305 - AZOBR_RS02100 0.85 -0.4 431,440 + +0.0 431,440 + -0.1 431,441 - -2.9 431,441 - -1.7 431,516 + +0.7 431,516 + -2.8 431,527 + -0.6 431,528 - +0.9 431,542 - +0.1 431,549 - -0.5 431,549 - +0.5 431,659 + +0.4 431,659 + +0.0 431,660 - -3.8 431,832 + +0.3 431,833 + -2.2 431,833 - -0.6 431,837 - -0.1 431,837 - -1.0 431,932 + -0.2 432,074 - -0.8 432,617 + AZOBR_RS02105 0.85 +0.1 432,702 - +0.3 432,702 - -0.3 432,820 + +0.6 432,820 + -0.3 432,820 + -1.5 432,821 - +0.0 432,821 - -0.2 432,821 - -0.6 432,821 - +0.6 432,821 - -1.1 432,910 + -0.0 433,408 + AZOBR_RS02110 0.24 +0.4 433,409 - AZOBR_RS02110 0.24 -0.2 433,558 + AZOBR_RS02110 0.30 -0.4 433,558 + AZOBR_RS02110 0.30 -3.4 433,559 - AZOBR_RS02110 0.30 -0.2
Or see this region's nucleotide sequence