Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00695 and AZOBR_RS00700 are separated by 101 nucleotides AZOBR_RS00700 and AZOBR_RS00705 are separated by 399 nucleotides
AZOBR_RS00695: AZOBR_RS00695 - transporter, at 137,157 to 138,806
_RS00695
AZOBR_RS00700: AZOBR_RS00700 - transporter, at 138,908 to 140,587
_RS00700
AZOBR_RS00705: AZOBR_RS00705 - cytochrome C biogenesis protein CcmA, at 140,987 to 141,628
_RS00705
Position (kb)
138
139
140
141 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 138.316 kb on + strand, within AZOBR_RS00695 at 138.316 kb on + strand, within AZOBR_RS00695 at 138.317 kb on - strand, within AZOBR_RS00695 at 138.592 kb on + strand, within AZOBR_RS00695 at 138.592 kb on + strand, within AZOBR_RS00695 at 138.592 kb on + strand, within AZOBR_RS00695 at 138.593 kb on - strand, within AZOBR_RS00695 at 138.735 kb on + strand at 138.735 kb on + strand at 138.735 kb on + strand at 138.735 kb on + strand at 138.736 kb on - strand at 138.909 kb on + strand at 138.910 kb on - strand at 138.910 kb on - strand at 138.959 kb on - strand at 138.964 kb on + strand at 138.965 kb on - strand at 138.969 kb on + strand at 138.969 kb on + strand at 139.080 kb on + strand, within AZOBR_RS00700 at 139.080 kb on + strand, within AZOBR_RS00700 at 139.081 kb on - strand, within AZOBR_RS00700 at 139.389 kb on + strand, within AZOBR_RS00700 at 139.389 kb on + strand, within AZOBR_RS00700 at 139.389 kb on + strand, within AZOBR_RS00700 at 139.389 kb on + strand, within AZOBR_RS00700 at 139.389 kb on + strand, within AZOBR_RS00700 at 139.390 kb on - strand, within AZOBR_RS00700 at 139.390 kb on - strand, within AZOBR_RS00700 at 139.390 kb on - strand, within AZOBR_RS00700 at 139.390 kb on - strand, within AZOBR_RS00700 at 139.615 kb on - strand, within AZOBR_RS00700 at 140.343 kb on + strand, within AZOBR_RS00700 at 140.343 kb on + strand, within AZOBR_RS00700 at 140.344 kb on - strand, within AZOBR_RS00700 at 140.344 kb on - strand, within AZOBR_RS00700 at 140.633 kb on - strand at 140.677 kb on - strand at 140.787 kb on - strand at 140.953 kb on + strand at 140.953 kb on + strand at 140.954 kb on - strand at 140.954 kb on - strand at 140.954 kb on - strand at 140.955 kb on + strand at 140.955 kb on + strand at 140.955 kb on + strand at 140.955 kb on + strand at 140.955 kb on + strand at 140.955 kb on + strand at 140.956 kb on - strand at 140.956 kb on - strand at 140.956 kb on - strand at 140.956 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 138,316 + AZOBR_RS00695 0.70 -0.6 138,316 + AZOBR_RS00695 0.70 +0.4 138,317 - AZOBR_RS00695 0.70 -0.9 138,592 + AZOBR_RS00695 0.87 +0.8 138,592 + AZOBR_RS00695 0.87 +0.9 138,592 + AZOBR_RS00695 0.87 +0.8 138,593 - AZOBR_RS00695 0.87 -0.2 138,735 + +0.8 138,735 + +1.1 138,735 + -1.5 138,735 + -0.9 138,736 - +0.8 138,909 + -2.5 138,910 - -0.1 138,910 - -0.2 138,959 - -0.7 138,964 + +0.4 138,965 - -2.7 138,969 + -1.0 138,969 + -0.5 139,080 + AZOBR_RS00700 0.10 -0.7 139,080 + AZOBR_RS00700 0.10 +1.4 139,081 - AZOBR_RS00700 0.10 -0.8 139,389 + AZOBR_RS00700 0.29 -1.4 139,389 + AZOBR_RS00700 0.29 -0.6 139,389 + AZOBR_RS00700 0.29 -0.5 139,389 + AZOBR_RS00700 0.29 +0.2 139,389 + AZOBR_RS00700 0.29 -0.3 139,390 - AZOBR_RS00700 0.29 +0.8 139,390 - AZOBR_RS00700 0.29 +1.2 139,390 - AZOBR_RS00700 0.29 -1.1 139,390 - AZOBR_RS00700 0.29 +0.5 139,615 - AZOBR_RS00700 0.42 +1.2 140,343 + AZOBR_RS00700 0.85 +0.7 140,343 + AZOBR_RS00700 0.85 -2.8 140,344 - AZOBR_RS00700 0.85 +0.3 140,344 - AZOBR_RS00700 0.85 -0.2 140,633 - +0.6 140,677 - -0.8 140,787 - -0.7 140,953 + -0.9 140,953 + -0.2 140,954 - -0.4 140,954 - +0.1 140,954 - -2.7 140,955 + -0.4 140,955 + +0.1 140,955 + +0.4 140,955 + +0.7 140,955 + -0.5 140,955 + -0.3 140,956 - +0.6 140,956 - +0.5 140,956 - -1.4 140,956 - -2.8
Or see this region's nucleotide sequence