Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00485 and AZOBR_RS00490 are separated by 746 nucleotides AZOBR_RS00490 and AZOBR_RS00495 are separated by 775 nucleotides
AZOBR_RS00485: AZOBR_RS00485 - hypothetical protein, at 90,767 to 91,531
_RS00485
AZOBR_RS00490: AZOBR_RS00490 - oxidoreductase, at 92,278 to 92,754
_RS00490
AZOBR_RS00495: AZOBR_RS00495 - dihydrofolate reductase folM, at 93,530 to 94,258
_RS00495
Position (kb) 92
93 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 91.683 kb on + strand at 92.103 kb on + strand at 92.127 kb on + strand at 92.127 kb on + strand at 92.128 kb on - strand at 92.188 kb on + strand at 92.189 kb on - strand at 92.325 kb on - strand at 92.364 kb on - strand, within AZOBR_RS00490 at 92.402 kb on + strand, within AZOBR_RS00490 at 92.402 kb on + strand, within AZOBR_RS00490 at 92.402 kb on + strand, within AZOBR_RS00490 at 92.403 kb on - strand, within AZOBR_RS00490 at 92.403 kb on - strand, within AZOBR_RS00490 at 92.403 kb on - strand, within AZOBR_RS00490 at 92.573 kb on + strand, within AZOBR_RS00490 at 92.573 kb on + strand, within AZOBR_RS00490 at 92.573 kb on + strand, within AZOBR_RS00490 at 92.574 kb on - strand, within AZOBR_RS00490 at 92.574 kb on - strand, within AZOBR_RS00490 at 92.574 kb on - strand, within AZOBR_RS00490 at 92.740 kb on + strand at 92.892 kb on - strand at 93.020 kb on - strand at 93.219 kb on - strand at 93.219 kb on - strand at 93.227 kb on + strand at 93.227 kb on + strand at 93.228 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 91,683 + -0.1 92,103 + +0.9 92,127 + +2.1 92,127 + -1.2 92,128 - +0.3 92,188 + +0.4 92,189 - +0.4 92,325 - +0.3 92,364 - AZOBR_RS00490 0.18 -2.2 92,402 + AZOBR_RS00490 0.26 +2.9 92,402 + AZOBR_RS00490 0.26 -2.7 92,402 + AZOBR_RS00490 0.26 -0.7 92,403 - AZOBR_RS00490 0.26 -0.4 92,403 - AZOBR_RS00490 0.26 -0.3 92,403 - AZOBR_RS00490 0.26 -1.2 92,573 + AZOBR_RS00490 0.62 +0.5 92,573 + AZOBR_RS00490 0.62 -1.1 92,573 + AZOBR_RS00490 0.62 -3.3 92,574 - AZOBR_RS00490 0.62 -1.8 92,574 - AZOBR_RS00490 0.62 -0.6 92,574 - AZOBR_RS00490 0.62 -1.8 92,740 + +1.1 92,892 - -0.4 93,020 - -0.1 93,219 - +1.6 93,219 - +0.7 93,227 + -2.9 93,227 + +1.1 93,228 - -0.5
Or see this region's nucleotide sequence