Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32100 and AZOBR_RS32105 overlap by 4 nucleotides AZOBR_RS32105 and AZOBR_RS32110 are separated by 11 nucleotides
AZOBR_RS32100: AZOBR_RS32100 - cytochrome C, at 572,893 to 573,513
_RS32100
AZOBR_RS32105: AZOBR_RS32105 - nitrate reductase, at 573,510 to 573,992
_RS32105
AZOBR_RS32110: AZOBR_RS32110 - nitrate reductase catalytic subunit, at 574,004 to 576,514
_RS32110
Position (kb) 573
574 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 572.530 kb on - strand at 572.586 kb on - strand at 572.656 kb on - strand at 572.661 kb on + strand at 572.662 kb on - strand at 572.820 kb on + strand at 572.820 kb on + strand at 572.820 kb on + strand at 573.005 kb on + strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.317 kb on + strand, within AZOBR_RS32100 at 573.620 kb on - strand, within AZOBR_RS32105 at 573.761 kb on - strand, within AZOBR_RS32105 at 573.761 kb on - strand, within AZOBR_RS32105 at 574.392 kb on + strand, within AZOBR_RS32110 at 574.393 kb on - strand, within AZOBR_RS32110 at 574.393 kb on - strand, within AZOBR_RS32110 at 574.393 kb on - strand, within AZOBR_RS32110 at 574.435 kb on - strand, within AZOBR_RS32110 at 574.464 kb on + strand, within AZOBR_RS32110 at 574.465 kb on - strand, within AZOBR_RS32110 at 574.545 kb on + strand, within AZOBR_RS32110 at 574.545 kb on + strand, within AZOBR_RS32110 at 574.545 kb on + strand, within AZOBR_RS32110 at 574.545 kb on + strand, within AZOBR_RS32110 at 574.546 kb on - strand, within AZOBR_RS32110 at 574.546 kb on - strand, within AZOBR_RS32110 at 574.546 kb on - strand, within AZOBR_RS32110 at 574.546 kb on - strand, within AZOBR_RS32110 at 574.555 kb on - strand, within AZOBR_RS32110 at 574.597 kb on - strand, within AZOBR_RS32110 at 574.623 kb on + strand, within AZOBR_RS32110 at 574.623 kb on + strand, within AZOBR_RS32110 at 574.624 kb on - strand, within AZOBR_RS32110 at 574.624 kb on - strand, within AZOBR_RS32110 at 574.624 kb on - strand, within AZOBR_RS32110 at 574.624 kb on - strand, within AZOBR_RS32110 at 574.657 kb on - strand, within AZOBR_RS32110 at 574.707 kb on + strand, within AZOBR_RS32110 at 574.707 kb on + strand, within AZOBR_RS32110 at 574.708 kb on - strand, within AZOBR_RS32110 at 574.708 kb on - strand, within AZOBR_RS32110 at 574.708 kb on - strand, within AZOBR_RS32110 at 574.708 kb on - strand, within AZOBR_RS32110 at 574.963 kb on - strand, within AZOBR_RS32110
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 572,530 - +1.2 572,586 - -0.6 572,656 - +3.0 572,661 + +1.4 572,662 - +2.2 572,820 + +0.4 572,820 + +0.3 572,820 + +0.8 573,005 + AZOBR_RS32100 0.18 -1.9 573,006 - AZOBR_RS32100 0.18 +0.3 573,006 - AZOBR_RS32100 0.18 +1.1 573,006 - AZOBR_RS32100 0.18 +1.4 573,006 - AZOBR_RS32100 0.18 -2.9 573,317 + AZOBR_RS32100 0.68 +0.7 573,620 - AZOBR_RS32105 0.23 -0.2 573,761 - AZOBR_RS32105 0.52 -0.2 573,761 - AZOBR_RS32105 0.52 -0.7 574,392 + AZOBR_RS32110 0.15 +3.0 574,393 - AZOBR_RS32110 0.15 -0.1 574,393 - AZOBR_RS32110 0.15 -1.9 574,393 - AZOBR_RS32110 0.15 +0.0 574,435 - AZOBR_RS32110 0.17 +0.0 574,464 + AZOBR_RS32110 0.18 +0.2 574,465 - AZOBR_RS32110 0.18 +1.5 574,545 + AZOBR_RS32110 0.22 +0.0 574,545 + AZOBR_RS32110 0.22 +0.8 574,545 + AZOBR_RS32110 0.22 -3.5 574,545 + AZOBR_RS32110 0.22 +1.4 574,546 - AZOBR_RS32110 0.22 -0.7 574,546 - AZOBR_RS32110 0.22 -0.8 574,546 - AZOBR_RS32110 0.22 -1.4 574,546 - AZOBR_RS32110 0.22 -3.6 574,555 - AZOBR_RS32110 0.22 -0.3 574,597 - AZOBR_RS32110 0.24 +0.8 574,623 + AZOBR_RS32110 0.25 -2.6 574,623 + AZOBR_RS32110 0.25 -1.0 574,624 - AZOBR_RS32110 0.25 +0.2 574,624 - AZOBR_RS32110 0.25 -1.1 574,624 - AZOBR_RS32110 0.25 +0.5 574,624 - AZOBR_RS32110 0.25 -0.5 574,657 - AZOBR_RS32110 0.26 +0.4 574,707 + AZOBR_RS32110 0.28 +1.2 574,707 + AZOBR_RS32110 0.28 +1.0 574,708 - AZOBR_RS32110 0.28 +2.6 574,708 - AZOBR_RS32110 0.28 -1.9 574,708 - AZOBR_RS32110 0.28 -1.7 574,708 - AZOBR_RS32110 0.28 -1.8 574,963 - AZOBR_RS32110 0.38 +0.1
Or see this region's nucleotide sequence