Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25625 and AZOBR_RS25630 are separated by 23 nucleotides AZOBR_RS25630 and AZOBR_RS25635 overlap by 4 nucleotides AZOBR_RS25635 and AZOBR_RS25645 are separated by 997 nucleotides
AZOBR_RS25625: AZOBR_RS25625 - leucine/isoleucine/valine transporter ATP-binding subunit, at 797,760 to 798,458
_RS25625
AZOBR_RS25630: AZOBR_RS25630 - ABC transporter, at 798,482 to 799,249
_RS25630
AZOBR_RS25635: AZOBR_RS25635 - high-affinity branched-chain amino acid ABC transporter (permease protein) (fragment), at 799,246 to 800,232
_RS25635
AZOBR_RS25645: AZOBR_RS25645 - amino acid ABC transporter substrate-binding protein, at 801,230 to 802,342
_RS25645
Position (kb) 799
800
801 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 798.501 kb on + strand at 798.501 kb on + strand at 798.768 kb on + strand, within AZOBR_RS25630 at 798.769 kb on - strand, within AZOBR_RS25630 at 799.547 kb on + strand, within AZOBR_RS25635 at 799.548 kb on - strand, within AZOBR_RS25635 at 799.548 kb on - strand, within AZOBR_RS25635 at 799.548 kb on - strand, within AZOBR_RS25635 at 799.548 kb on - strand, within AZOBR_RS25635 at 799.548 kb on - strand, within AZOBR_RS25635 at 799.697 kb on + strand, within AZOBR_RS25635 at 799.697 kb on + strand, within AZOBR_RS25635 at 799.697 kb on + strand, within AZOBR_RS25635 at 799.698 kb on - strand, within AZOBR_RS25635 at 799.757 kb on + strand, within AZOBR_RS25635 at 799.758 kb on - strand, within AZOBR_RS25635 at 799.758 kb on - strand, within AZOBR_RS25635 at 799.760 kb on + strand, within AZOBR_RS25635 at 799.760 kb on + strand, within AZOBR_RS25635 at 799.760 kb on - strand, within AZOBR_RS25635 at 799.761 kb on - strand, within AZOBR_RS25635 at 799.761 kb on - strand, within AZOBR_RS25635 at 799.868 kb on + strand, within AZOBR_RS25635 at 799.907 kb on + strand, within AZOBR_RS25635 at 799.908 kb on - strand, within AZOBR_RS25635 at 799.908 kb on - strand, within AZOBR_RS25635 at 799.908 kb on - strand, within AZOBR_RS25635 at 800.034 kb on - strand, within AZOBR_RS25635 at 800.048 kb on + strand, within AZOBR_RS25635 at 800.048 kb on + strand, within AZOBR_RS25635 at 800.049 kb on - strand, within AZOBR_RS25635 at 800.156 kb on + strand at 800.156 kb on + strand at 800.157 kb on - strand at 800.508 kb on + strand at 800.508 kb on + strand at 800.509 kb on - strand at 800.509 kb on - strand at 800.598 kb on + strand at 800.598 kb on + strand at 800.598 kb on + strand at 800.599 kb on - strand at 800.599 kb on - strand at 800.668 kb on + strand at 800.767 kb on + strand at 800.767 kb on + strand at 801.043 kb on + strand at 801.043 kb on + strand at 801.044 kb on - strand at 801.118 kb on + strand at 801.119 kb on - strand at 801.119 kb on - strand at 801.119 kb on - strand at 801.160 kb on + strand at 801.160 kb on + strand at 801.160 kb on + strand at 801.160 kb on + strand at 801.161 kb on - strand at 801.161 kb on - strand at 801.163 kb on + strand at 801.163 kb on + strand at 801.163 kb on + strand at 801.163 kb on + strand at 801.164 kb on - strand at 801.164 kb on - strand at 801.164 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 798,501 + +0.2 798,501 + +0.8 798,768 + AZOBR_RS25630 0.37 +0.8 798,769 - AZOBR_RS25630 0.37 -2.9 799,547 + AZOBR_RS25635 0.30 +0.3 799,548 - AZOBR_RS25635 0.31 +0.7 799,548 - AZOBR_RS25635 0.31 +0.4 799,548 - AZOBR_RS25635 0.31 +0.2 799,548 - AZOBR_RS25635 0.31 -0.1 799,548 - AZOBR_RS25635 0.31 -0.3 799,697 + AZOBR_RS25635 0.46 +0.1 799,697 + AZOBR_RS25635 0.46 -3.1 799,697 + AZOBR_RS25635 0.46 +1.6 799,698 - AZOBR_RS25635 0.46 -1.0 799,757 + AZOBR_RS25635 0.52 -1.3 799,758 - AZOBR_RS25635 0.52 +0.7 799,758 - AZOBR_RS25635 0.52 -0.5 799,760 + AZOBR_RS25635 0.52 +1.3 799,760 + AZOBR_RS25635 0.52 -0.1 799,760 - AZOBR_RS25635 0.52 -2.5 799,761 - AZOBR_RS25635 0.52 +0.0 799,761 - AZOBR_RS25635 0.52 -0.1 799,868 + AZOBR_RS25635 0.63 +1.8 799,907 + AZOBR_RS25635 0.67 +2.0 799,908 - AZOBR_RS25635 0.67 +0.1 799,908 - AZOBR_RS25635 0.67 +1.0 799,908 - AZOBR_RS25635 0.67 -0.6 800,034 - AZOBR_RS25635 0.80 -0.1 800,048 + AZOBR_RS25635 0.81 -0.0 800,048 + AZOBR_RS25635 0.81 +0.2 800,049 - AZOBR_RS25635 0.81 -1.7 800,156 + -2.0 800,156 + +0.1 800,157 - +1.8 800,508 + -0.8 800,508 + -0.3 800,509 - -1.6 800,509 - -2.4 800,598 + -1.4 800,598 + -1.1 800,598 + -0.1 800,599 - -1.0 800,599 - +0.4 800,668 + -0.1 800,767 + -0.9 800,767 + -0.4 801,043 + +1.0 801,043 + -3.0 801,044 - -0.1 801,118 + -0.1 801,119 - -1.3 801,119 - -2.7 801,119 - +0.3 801,160 + -0.1 801,160 + -1.1 801,160 + +0.3 801,160 + +0.5 801,161 - -0.3 801,161 - -1.0 801,163 + -1.4 801,163 + +0.3 801,163 + +1.7 801,163 + +0.3 801,164 - -0.5 801,164 - -0.4 801,164 - -1.4
Or see this region's nucleotide sequence