Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25425 and AZOBR_RS25430 are separated by 32 nucleotides AZOBR_RS25430 and AZOBR_RS25435 overlap by 4 nucleotides AZOBR_RS25435 and AZOBR_RS25440 overlap by 4 nucleotides AZOBR_RS25440 and AZOBR_RS25445 are separated by 23 nucleotides
AZOBR_RS25425: AZOBR_RS25425 - dioxygenase, at 758,205 to 758,987
_RS25425
AZOBR_RS25430: AZOBR_RS25430 - Citrate lyase, at 759,020 to 759,871
_RS25430
AZOBR_RS25435: AZOBR_RS25435 - oxidoreductase, at 759,868 to 761,352
_RS25435
AZOBR_RS25440: AZOBR_RS25440 - hypothetical protein, at 761,349 to 761,804
_RS25440
AZOBR_RS25445: AZOBR_RS25445 - peptidase M19, at 761,828 to 762,811
_RS25445
Position (kb) 759
760
761
762 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 759.357 kb on + strand, within AZOBR_RS25430 at 759.498 kb on + strand, within AZOBR_RS25430 at 759.498 kb on + strand, within AZOBR_RS25430 at 759.699 kb on + strand, within AZOBR_RS25430 at 759.699 kb on + strand, within AZOBR_RS25430 at 759.700 kb on - strand, within AZOBR_RS25430 at 759.935 kb on + strand at 759.935 kb on + strand at 760.104 kb on - strand, within AZOBR_RS25435 at 760.544 kb on + strand, within AZOBR_RS25435 at 760.853 kb on + strand, within AZOBR_RS25435 at 760.946 kb on + strand, within AZOBR_RS25435 at 760.958 kb on + strand, within AZOBR_RS25435 at 760.958 kb on + strand, within AZOBR_RS25435 at 760.958 kb on + strand, within AZOBR_RS25435 at 761.027 kb on + strand, within AZOBR_RS25435 at 761.599 kb on + strand, within AZOBR_RS25440 at 761.600 kb on - strand, within AZOBR_RS25440 at 762.036 kb on + strand, within AZOBR_RS25445 at 762.110 kb on + strand, within AZOBR_RS25445 at 762.110 kb on + strand, within AZOBR_RS25445 at 762.241 kb on + strand, within AZOBR_RS25445 at 762.285 kb on + strand, within AZOBR_RS25445 at 762.286 kb on - strand, within AZOBR_RS25445 at 762.286 kb on - strand, within AZOBR_RS25445
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 759,357 + AZOBR_RS25430 0.40 -0.3 759,498 + AZOBR_RS25430 0.56 +1.7 759,498 + AZOBR_RS25430 0.56 -0.2 759,699 + AZOBR_RS25430 0.80 -0.1 759,699 + AZOBR_RS25430 0.80 -1.0 759,700 - AZOBR_RS25430 0.80 -0.1 759,935 + -3.1 759,935 + -0.5 760,104 - AZOBR_RS25435 0.16 +0.5 760,544 + AZOBR_RS25435 0.46 +1.1 760,853 + AZOBR_RS25435 0.66 +0.7 760,946 + AZOBR_RS25435 0.73 +0.8 760,958 + AZOBR_RS25435 0.73 -0.1 760,958 + AZOBR_RS25435 0.73 +1.2 760,958 + AZOBR_RS25435 0.73 +0.8 761,027 + AZOBR_RS25435 0.78 +0.5 761,599 + AZOBR_RS25440 0.55 +0.1 761,600 - AZOBR_RS25440 0.55 +0.0 762,036 + AZOBR_RS25445 0.21 -1.0 762,110 + AZOBR_RS25445 0.29 -1.0 762,110 + AZOBR_RS25445 0.29 -0.7 762,241 + AZOBR_RS25445 0.42 +0.0 762,285 + AZOBR_RS25445 0.46 -0.5 762,286 - AZOBR_RS25445 0.47 -0.1 762,286 - AZOBR_RS25445 0.47 -0.3
Or see this region's nucleotide sequence