Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24310 and AZOBR_RS24315 are separated by 31 nucleotides
AZOBR_RS24310: AZOBR_RS24310 - 3-methylitaconate isomerase, at 502,908 to 504,113
_RS24310
AZOBR_RS24315: AZOBR_RS24315 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 504,145 to 505,005
_RS24315
Position (kb) 504
505
506 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 503.163 kb on + strand, within AZOBR_RS24310 at 503.784 kb on + strand, within AZOBR_RS24310 at 503.784 kb on + strand, within AZOBR_RS24310 at 503.785 kb on - strand, within AZOBR_RS24310 at 503.785 kb on - strand, within AZOBR_RS24310 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.424 kb on + strand, within AZOBR_RS24315 at 504.425 kb on - strand, within AZOBR_RS24315 at 504.836 kb on - strand, within AZOBR_RS24315 at 504.836 kb on - strand, within AZOBR_RS24315 at 504.997 kb on + strand at 504.997 kb on + strand at 504.998 kb on - strand at 504.998 kb on - strand at 504.998 kb on - strand at 505.043 kb on + strand at 505.044 kb on - strand at 505.044 kb on - strand at 505.090 kb on - strand at 505.090 kb on - strand at 505.156 kb on + strand at 505.260 kb on + strand at 505.438 kb on + strand at 505.439 kb on - strand at 505.439 kb on - strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.525 kb on + strand at 505.526 kb on - strand at 505.561 kb on + strand at 505.561 kb on + strand at 505.562 kb on - strand at 505.562 kb on - strand at 505.576 kb on + strand at 505.576 kb on + strand at 505.576 kb on + strand at 505.576 kb on + strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.683 kb on - strand at 505.683 kb on - strand at 505.845 kb on - strand at 505.988 kb on + strand at 505.988 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 503,163 + AZOBR_RS24310 0.21 +0.5 503,784 + AZOBR_RS24310 0.73 +0.2 503,784 + AZOBR_RS24310 0.73 -0.0 503,785 - AZOBR_RS24310 0.73 +0.1 503,785 - AZOBR_RS24310 0.73 +1.2 504,262 + AZOBR_RS24315 0.14 +0.6 504,262 + AZOBR_RS24315 0.14 +0.6 504,262 + AZOBR_RS24315 0.14 -0.5 504,262 + AZOBR_RS24315 0.14 -0.2 504,262 + AZOBR_RS24315 0.14 +1.1 504,262 + AZOBR_RS24315 0.14 +0.6 504,263 - AZOBR_RS24315 0.14 -1.9 504,263 - AZOBR_RS24315 0.14 +0.0 504,263 - AZOBR_RS24315 0.14 -0.7 504,263 - AZOBR_RS24315 0.14 +0.5 504,263 - AZOBR_RS24315 0.14 +1.5 504,263 - AZOBR_RS24315 0.14 +2.5 504,263 - AZOBR_RS24315 0.14 -2.0 504,424 + AZOBR_RS24315 0.32 +0.1 504,425 - AZOBR_RS24315 0.33 -1.3 504,836 - AZOBR_RS24315 0.80 +0.6 504,836 - AZOBR_RS24315 0.80 -1.7 504,997 + +0.5 504,997 + +0.6 504,998 - +1.3 504,998 - +0.7 504,998 - +0.3 505,043 + -0.9 505,044 - -0.3 505,044 - +2.3 505,090 - +1.3 505,090 - +1.3 505,156 + -1.4 505,260 + -2.1 505,438 + +0.2 505,439 - +0.1 505,439 - +1.1 505,523 + -2.9 505,523 + +0.0 505,523 + -0.1 505,523 + -0.0 505,523 + +0.6 505,523 + -0.2 505,524 - +1.3 505,524 - -1.3 505,524 - +0.2 505,524 - +1.5 505,524 - -4.0 505,524 - +0.8 505,524 - +1.3 505,525 + +0.1 505,526 - -1.0 505,561 + -0.5 505,561 + -0.6 505,562 - +2.0 505,562 - -1.7 505,576 + +3.0 505,576 + -1.0 505,576 + -2.7 505,576 + -0.6 505,577 - -0.3 505,577 - +1.5 505,577 - +2.3 505,577 - -3.1 505,577 - -1.1 505,577 - +0.4 505,683 - -0.6 505,683 - -0.7 505,845 - +0.9 505,988 + -0.1 505,988 + -3.2
Or see this region's nucleotide sequence