Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22740 and AZOBR_RS22745 are separated by 280 nucleotides AZOBR_RS22745 and AZOBR_RS22750 are separated by 51 nucleotides
AZOBR_RS22740: AZOBR_RS22740 - transcriptional regulator, at 110,032 to 110,871
_RS22740
AZOBR_RS22745: AZOBR_RS22745 - ATPase AAA, at 111,152 to 113,818
_RS22745
AZOBR_RS22750: AZOBR_RS22750 - glutamyl-tRNA(Gln) amidotransferase, at 113,870 to 115,282
_RS22750
Position (kb)
111
112
113
114 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 110.270 kb on + strand, within AZOBR_RS22740 at 110.271 kb on - strand, within AZOBR_RS22740 at 110.271 kb on - strand, within AZOBR_RS22740 at 110.271 kb on - strand, within AZOBR_RS22740 at 110.358 kb on - strand, within AZOBR_RS22740 at 110.649 kb on - strand, within AZOBR_RS22740 at 110.649 kb on - strand, within AZOBR_RS22740 at 110.649 kb on - strand, within AZOBR_RS22740 at 110.653 kb on + strand, within AZOBR_RS22740 at 110.654 kb on - strand, within AZOBR_RS22740 at 110.871 kb on + strand at 110.872 kb on - strand at 110.907 kb on + strand at 110.926 kb on - strand at 111.134 kb on + strand at 111.644 kb on + strand, within AZOBR_RS22745 at 111.645 kb on - strand, within AZOBR_RS22745 at 112.118 kb on + strand, within AZOBR_RS22745 at 112.118 kb on + strand, within AZOBR_RS22745 at 112.119 kb on - strand, within AZOBR_RS22745 at 112.119 kb on - strand, within AZOBR_RS22745 at 112.223 kb on + strand, within AZOBR_RS22745 at 112.292 kb on + strand, within AZOBR_RS22745 at 112.292 kb on + strand, within AZOBR_RS22745 at 112.293 kb on - strand, within AZOBR_RS22745 at 112.642 kb on + strand, within AZOBR_RS22745 at 112.661 kb on + strand, within AZOBR_RS22745 at 112.661 kb on + strand, within AZOBR_RS22745 at 112.661 kb on + strand, within AZOBR_RS22745 at 112.662 kb on - strand, within AZOBR_RS22745 at 112.662 kb on - strand, within AZOBR_RS22745 at 113.051 kb on + strand, within AZOBR_RS22745 at 113.051 kb on + strand, within AZOBR_RS22745 at 113.052 kb on - strand, within AZOBR_RS22745 at 113.108 kb on + strand, within AZOBR_RS22745 at 113.109 kb on - strand, within AZOBR_RS22745 at 113.949 kb on + strand at 114.045 kb on + strand, within AZOBR_RS22750 at 114.046 kb on - strand, within AZOBR_RS22750 at 114.046 kb on - strand, within AZOBR_RS22750 at 114.046 kb on - strand, within AZOBR_RS22750 at 114.046 kb on - strand, within AZOBR_RS22750 at 114.315 kb on + strand, within AZOBR_RS22750
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 110,270 + AZOBR_RS22740 0.28 +1.3 110,271 - AZOBR_RS22740 0.28 -0.2 110,271 - AZOBR_RS22740 0.28 -0.1 110,271 - AZOBR_RS22740 0.28 -0.0 110,358 - AZOBR_RS22740 0.39 -0.1 110,649 - AZOBR_RS22740 0.73 +0.1 110,649 - AZOBR_RS22740 0.73 +1.3 110,649 - AZOBR_RS22740 0.73 -0.1 110,653 + AZOBR_RS22740 0.74 +0.3 110,654 - AZOBR_RS22740 0.74 -0.4 110,871 + -0.3 110,872 - +1.1 110,907 + -0.3 110,926 - -0.4 111,134 + +1.0 111,644 + AZOBR_RS22745 0.18 -1.4 111,645 - AZOBR_RS22745 0.18 -0.6 112,118 + AZOBR_RS22745 0.36 -0.2 112,118 + AZOBR_RS22745 0.36 +1.0 112,119 - AZOBR_RS22745 0.36 -0.9 112,119 - AZOBR_RS22745 0.36 -2.2 112,223 + AZOBR_RS22745 0.40 +0.5 112,292 + AZOBR_RS22745 0.43 +0.4 112,292 + AZOBR_RS22745 0.43 +1.1 112,293 - AZOBR_RS22745 0.43 -1.6 112,642 + AZOBR_RS22745 0.56 +0.8 112,661 + AZOBR_RS22745 0.57 +0.4 112,661 + AZOBR_RS22745 0.57 +1.0 112,661 + AZOBR_RS22745 0.57 -0.4 112,662 - AZOBR_RS22745 0.57 -2.5 112,662 - AZOBR_RS22745 0.57 -2.8 113,051 + AZOBR_RS22745 0.71 -2.2 113,051 + AZOBR_RS22745 0.71 +1.6 113,052 - AZOBR_RS22745 0.71 -0.0 113,108 + AZOBR_RS22745 0.73 -0.6 113,109 - AZOBR_RS22745 0.73 -0.6 113,949 + -0.6 114,045 + AZOBR_RS22750 0.12 -1.6 114,046 - AZOBR_RS22750 0.12 +0.8 114,046 - AZOBR_RS22750 0.12 -0.8 114,046 - AZOBR_RS22750 0.12 +0.0 114,046 - AZOBR_RS22750 0.12 +0.2 114,315 + AZOBR_RS22750 0.31 +0.2
Or see this region's nucleotide sequence