Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS22300

Experiment: 2-pentyl-furan 2.671 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS22295 and AZOBR_RS22300 are separated by 28 nucleotides AZOBR_RS22295: AZOBR_RS22295 - methylcrotonoyl-CoA carboxylase, at 6,675 to 8,282 _RS22295 AZOBR_RS22300: AZOBR_RS22300 - acyl-CoA dehydrogenase, at 8,311 to 9,444 _RS22300 Position (kb) 8 9 10Strain fitness (log2 ratio) -2 -1 0 1at 7.433 kb on - strand, within AZOBR_RS22295at 8.313 kb on - strandat 8.313 kb on - strandat 8.313 kb on - strandat 8.313 kb on - strandat 8.313 kb on - strandat 8.367 kb on - strandat 8.394 kb on - strandat 8.394 kb on - strandat 8.661 kb on - strand, within AZOBR_RS22300at 8.797 kb on - strandat 9.511 kb on - strandat 9.543 kb on - strandat 9.543 kb on - strandat 10.210 kb on - strandat 10.379 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM
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7,433 - AZOBR_RS22295 0.47 -1.3
8,313 - -2.3
8,313 - +0.6
8,313 - -1.3
8,313 - +0.2
8,313 - +1.0
8,367 - -2.4
8,394 - -0.6
8,394 - -0.2
8,661 - AZOBR_RS22300 0.31 +0.0
8,797 - -0.3
9,511 - -0.6
9,543 - -0.4
9,543 - +0.2
10,210 - -0.2
10,379 - -0.3

Or see this region's nucleotide sequence