Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18165 and AZOBR_RS18170 are separated by 130 nucleotides AZOBR_RS18170 and AZOBR_RS18175 are separated by 257 nucleotides
AZOBR_RS18165: AZOBR_RS18165 - 2 5-dioxovalerate dehydrogenase, at 833,059 to 834,639
_RS18165
AZOBR_RS18170: AZOBR_RS18170 - sugar ABC transporter, at 834,770 to 836,005
_RS18170
AZOBR_RS18175: AZOBR_RS18175 - sugar ABC transporter, at 836,263 to 837,150
_RS18175
Position (kb) 834
835
836
837 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 833.810 kb on - strand, within AZOBR_RS18165 at 834.710 kb on + strand at 834.710 kb on + strand at 834.711 kb on - strand at 835.062 kb on - strand, within AZOBR_RS18170 at 835.145 kb on + strand, within AZOBR_RS18170 at 835.146 kb on - strand, within AZOBR_RS18170 at 835.196 kb on + strand, within AZOBR_RS18170 at 835.196 kb on + strand, within AZOBR_RS18170 at 835.196 kb on + strand, within AZOBR_RS18170 at 835.197 kb on - strand, within AZOBR_RS18170 at 835.208 kb on + strand, within AZOBR_RS18170 at 835.208 kb on + strand, within AZOBR_RS18170 at 835.209 kb on - strand, within AZOBR_RS18170 at 835.298 kb on + strand, within AZOBR_RS18170 at 835.298 kb on + strand, within AZOBR_RS18170 at 835.298 kb on + strand, within AZOBR_RS18170 at 835.299 kb on - strand, within AZOBR_RS18170 at 835.346 kb on + strand, within AZOBR_RS18170 at 835.448 kb on + strand, within AZOBR_RS18170 at 835.460 kb on + strand, within AZOBR_RS18170 at 835.502 kb on + strand, within AZOBR_RS18170 at 835.503 kb on - strand, within AZOBR_RS18170 at 835.503 kb on - strand, within AZOBR_RS18170 at 835.824 kb on - strand, within AZOBR_RS18170 at 836.003 kb on + strand at 836.047 kb on - strand at 836.047 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.110 kb on - strand at 836.315 kb on - strand at 836.404 kb on + strand, within AZOBR_RS18175 at 836.404 kb on + strand, within AZOBR_RS18175 at 836.405 kb on - strand, within AZOBR_RS18175 at 836.405 kb on - strand, within AZOBR_RS18175 at 836.405 kb on - strand, within AZOBR_RS18175 at 836.405 kb on - strand, within AZOBR_RS18175 at 836.405 kb on - strand, within AZOBR_RS18175 at 836.648 kb on - strand, within AZOBR_RS18175 at 836.923 kb on - strand, within AZOBR_RS18175
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 833,810 - AZOBR_RS18165 0.48 -0.8 834,710 + -0.4 834,710 + -1.3 834,711 - +0.1 835,062 - AZOBR_RS18170 0.24 +0.8 835,145 + AZOBR_RS18170 0.30 +0.0 835,146 - AZOBR_RS18170 0.30 -0.9 835,196 + AZOBR_RS18170 0.34 +0.3 835,196 + AZOBR_RS18170 0.34 -0.4 835,196 + AZOBR_RS18170 0.34 -0.2 835,197 - AZOBR_RS18170 0.35 -1.0 835,208 + AZOBR_RS18170 0.35 -0.2 835,208 + AZOBR_RS18170 0.35 -2.5 835,209 - AZOBR_RS18170 0.36 -0.2 835,298 + AZOBR_RS18170 0.43 -0.5 835,298 + AZOBR_RS18170 0.43 -0.3 835,298 + AZOBR_RS18170 0.43 +0.1 835,299 - AZOBR_RS18170 0.43 -0.7 835,346 + AZOBR_RS18170 0.47 +0.1 835,448 + AZOBR_RS18170 0.55 +1.8 835,460 + AZOBR_RS18170 0.56 -0.3 835,502 + AZOBR_RS18170 0.59 +0.7 835,503 - AZOBR_RS18170 0.59 +0.0 835,503 - AZOBR_RS18170 0.59 -3.2 835,824 - AZOBR_RS18170 0.85 -1.5 836,003 + +0.3 836,047 - -0.8 836,047 - +0.1 836,110 - -0.1 836,110 - -0.8 836,110 - -0.8 836,110 - -0.4 836,110 - +0.6 836,110 - -1.3 836,110 - +0.2 836,110 - +0.3 836,315 - -0.6 836,404 + AZOBR_RS18175 0.16 -0.5 836,404 + AZOBR_RS18175 0.16 +0.1 836,405 - AZOBR_RS18175 0.16 -0.7 836,405 - AZOBR_RS18175 0.16 -0.1 836,405 - AZOBR_RS18175 0.16 +0.5 836,405 - AZOBR_RS18175 0.16 +2.0 836,405 - AZOBR_RS18175 0.16 +0.1 836,648 - AZOBR_RS18175 0.43 -0.2 836,923 - AZOBR_RS18175 0.74 -1.0
Or see this region's nucleotide sequence