Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10600 and AZOBR_RS10605 are separated by 39 nucleotides AZOBR_RS10605 and AZOBR_RS10610 are separated by 217 nucleotides
AZOBR_RS10600: AZOBR_RS10600 - peptidase C69, at 2,225,572 to 2,227,005
_RS10600
AZOBR_RS10605: AZOBR_RS10605 - amino acid-binding protein, at 2,227,045 to 2,227,569
_RS10605
AZOBR_RS10610: AZOBR_RS10610 - hypothetical protein, at 2,227,787 to 2,229,862
_RS10610
Position (kb)
2227
2228 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2226.196 kb on + strand, within AZOBR_RS10600 at 2226.205 kb on + strand, within AZOBR_RS10600 at 2226.205 kb on + strand, within AZOBR_RS10600 at 2226.205 kb on + strand, within AZOBR_RS10600 at 2226.205 kb on + strand, within AZOBR_RS10600 at 2226.206 kb on - strand, within AZOBR_RS10600 at 2226.206 kb on - strand, within AZOBR_RS10600 at 2226.206 kb on - strand, within AZOBR_RS10600 at 2226.206 kb on - strand, within AZOBR_RS10600 at 2226.550 kb on + strand, within AZOBR_RS10600 at 2226.673 kb on + strand, within AZOBR_RS10600 at 2226.716 kb on - strand, within AZOBR_RS10600 at 2226.787 kb on + strand, within AZOBR_RS10600 at 2226.787 kb on + strand, within AZOBR_RS10600 at 2227.457 kb on - strand, within AZOBR_RS10605 at 2227.457 kb on - strand, within AZOBR_RS10605 at 2227.568 kb on - strand at 2227.568 kb on - strand at 2228.027 kb on + strand, within AZOBR_RS10610 at 2228.028 kb on - strand, within AZOBR_RS10610 at 2228.180 kb on + strand, within AZOBR_RS10610 at 2228.180 kb on + strand, within AZOBR_RS10610 at 2228.180 kb on + strand, within AZOBR_RS10610 at 2228.181 kb on - strand, within AZOBR_RS10610 at 2228.253 kb on - strand, within AZOBR_RS10610 at 2228.426 kb on + strand, within AZOBR_RS10610 at 2228.426 kb on + strand, within AZOBR_RS10610 at 2228.427 kb on - strand, within AZOBR_RS10610
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 2,226,196 + AZOBR_RS10600 0.44 -0.0 2,226,205 + AZOBR_RS10600 0.44 +1.7 2,226,205 + AZOBR_RS10600 0.44 -0.9 2,226,205 + AZOBR_RS10600 0.44 -3.1 2,226,205 + AZOBR_RS10600 0.44 +0.7 2,226,206 - AZOBR_RS10600 0.44 +0.4 2,226,206 - AZOBR_RS10600 0.44 +3.1 2,226,206 - AZOBR_RS10600 0.44 -0.5 2,226,206 - AZOBR_RS10600 0.44 +0.3 2,226,550 + AZOBR_RS10600 0.68 -0.2 2,226,673 + AZOBR_RS10600 0.77 +0.1 2,226,716 - AZOBR_RS10600 0.80 +0.7 2,226,787 + AZOBR_RS10600 0.85 +0.5 2,226,787 + AZOBR_RS10600 0.85 +0.4 2,227,457 - AZOBR_RS10605 0.78 -0.5 2,227,457 - AZOBR_RS10605 0.78 -0.6 2,227,568 - -0.6 2,227,568 - +1.0 2,228,027 + AZOBR_RS10610 0.12 +0.2 2,228,028 - AZOBR_RS10610 0.12 +0.1 2,228,180 + AZOBR_RS10610 0.19 -1.2 2,228,180 + AZOBR_RS10610 0.19 +0.1 2,228,180 + AZOBR_RS10610 0.19 -2.4 2,228,181 - AZOBR_RS10610 0.19 +0.5 2,228,253 - AZOBR_RS10610 0.22 -1.1 2,228,426 + AZOBR_RS10610 0.31 -0.7 2,228,426 + AZOBR_RS10610 0.31 -1.9 2,228,427 - AZOBR_RS10610 0.31 -0.7
Or see this region's nucleotide sequence