Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08925 and AZOBR_RS08930 are separated by 21 nucleotides AZOBR_RS08930 and AZOBR_RS08935 are separated by 74 nucleotides AZOBR_RS08935 and AZOBR_RS08940 are separated by 89 nucleotides
AZOBR_RS08925: AZOBR_RS08925 - hypothetical protein, at 1,868,310 to 1,869,464
_RS08925
AZOBR_RS08930: AZOBR_RS08930 - homoserine lactone transporter, at 1,869,486 to 1,870,121
_RS08930
AZOBR_RS08935: AZOBR_RS08935 - exported protein of unknown function, at 1,870,196 to 1,870,876
_RS08935
AZOBR_RS08940: AZOBR_RS08940 - molybdenum cofactor biosynthesis protein MoaE, at 1,870,966 to 1,871,424
_RS08940
Position (kb) 1869
1870
1871 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1868.517 kb on + strand, within AZOBR_RS08925 at 1868.518 kb on - strand, within AZOBR_RS08925 at 1868.518 kb on - strand, within AZOBR_RS08925 at 1869.192 kb on + strand, within AZOBR_RS08925 at 1869.192 kb on + strand, within AZOBR_RS08925 at 1869.249 kb on + strand, within AZOBR_RS08925 at 1869.258 kb on + strand, within AZOBR_RS08925 at 1869.258 kb on + strand, within AZOBR_RS08925 at 1869.258 kb on + strand, within AZOBR_RS08925 at 1869.258 kb on + strand, within AZOBR_RS08925 at 1869.259 kb on - strand, within AZOBR_RS08925 at 1869.259 kb on - strand, within AZOBR_RS08925 at 1869.372 kb on + strand at 1869.613 kb on + strand, within AZOBR_RS08930 at 1869.613 kb on + strand, within AZOBR_RS08930 at 1869.878 kb on - strand, within AZOBR_RS08930 at 1870.264 kb on - strand, within AZOBR_RS08935 at 1870.488 kb on + strand, within AZOBR_RS08935 at 1870.488 kb on + strand, within AZOBR_RS08935
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 1,868,517 + AZOBR_RS08925 0.18 +1.9 1,868,518 - AZOBR_RS08925 0.18 +0.1 1,868,518 - AZOBR_RS08925 0.18 -1.8 1,869,192 + AZOBR_RS08925 0.76 -0.1 1,869,192 + AZOBR_RS08925 0.76 +0.9 1,869,249 + AZOBR_RS08925 0.81 -1.0 1,869,258 + AZOBR_RS08925 0.82 +0.0 1,869,258 + AZOBR_RS08925 0.82 -0.6 1,869,258 + AZOBR_RS08925 0.82 +0.4 1,869,258 + AZOBR_RS08925 0.82 -0.0 1,869,259 - AZOBR_RS08925 0.82 -0.1 1,869,259 - AZOBR_RS08925 0.82 -0.5 1,869,372 + -0.9 1,869,613 + AZOBR_RS08930 0.20 +0.6 1,869,613 + AZOBR_RS08930 0.20 -2.6 1,869,878 - AZOBR_RS08930 0.62 -0.6 1,870,264 - AZOBR_RS08935 0.10 -0.6 1,870,488 + AZOBR_RS08935 0.43 +1.7 1,870,488 + AZOBR_RS08935 0.43 -3.1
Or see this region's nucleotide sequence