Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08445 and AZOBR_RS08450 are separated by 63 nucleotides AZOBR_RS08450 and AZOBR_RS08455 are separated by 25 nucleotides AZOBR_RS08455 and AZOBR_RS08460 are separated by 227 nucleotides
AZOBR_RS08445: AZOBR_RS08445 - delta-aminolevulinic acid dehydratase, at 1,773,048 to 1,774,061
_RS08445
AZOBR_RS08450: AZOBR_RS08450 - 3' 5'-cyclic-nucleotide phosphodiesterase, at 1,774,125 to 1,774,973
_RS08450
AZOBR_RS08455: AZOBR_RS08455 - diacylglycerol kinase, at 1,774,999 to 1,775,919
_RS08455
AZOBR_RS08460: AZOBR_RS08460 - enoyl-CoA hydratase, at 1,776,147 to 1,777,223
_RS08460
Position (kb)
1774
1775
1776 Strain fitness (log2 ratio)
-2
-1
0
1 at 1774.104 kb on - strand at 1774.288 kb on + strand, within AZOBR_RS08450 at 1774.289 kb on - strand, within AZOBR_RS08450 at 1774.394 kb on - strand, within AZOBR_RS08450 at 1774.700 kb on - strand, within AZOBR_RS08450 at 1774.708 kb on + strand, within AZOBR_RS08450 at 1774.709 kb on - strand, within AZOBR_RS08450 at 1774.709 kb on - strand, within AZOBR_RS08450 at 1774.709 kb on - strand, within AZOBR_RS08450 at 1774.709 kb on - strand, within AZOBR_RS08450 at 1774.747 kb on + strand, within AZOBR_RS08450 at 1774.747 kb on + strand, within AZOBR_RS08450 at 1774.748 kb on - strand, within AZOBR_RS08450 at 1775.079 kb on - strand at 1775.079 kb on - strand at 1775.079 kb on - strand at 1775.264 kb on + strand, within AZOBR_RS08455 at 1775.264 kb on + strand, within AZOBR_RS08455 at 1775.264 kb on + strand, within AZOBR_RS08455 at 1775.265 kb on - strand, within AZOBR_RS08455 at 1775.265 kb on - strand, within AZOBR_RS08455 at 1775.265 kb on - strand, within AZOBR_RS08455 at 1775.265 kb on - strand, within AZOBR_RS08455 at 1775.265 kb on - strand, within AZOBR_RS08455 at 1775.603 kb on + strand, within AZOBR_RS08455 at 1775.604 kb on - strand, within AZOBR_RS08455 at 1775.869 kb on - strand at 1776.086 kb on + strand at 1776.087 kb on - strand at 1776.379 kb on - strand, within AZOBR_RS08460 at 1776.450 kb on + strand, within AZOBR_RS08460 at 1776.451 kb on - strand, within AZOBR_RS08460 at 1776.489 kb on + strand, within AZOBR_RS08460 at 1776.489 kb on + strand, within AZOBR_RS08460 at 1776.489 kb on + strand, within AZOBR_RS08460 at 1776.489 kb on + strand, within AZOBR_RS08460 at 1776.610 kb on - strand, within AZOBR_RS08460 at 1776.631 kb on - strand, within AZOBR_RS08460 at 1776.631 kb on - strand, within AZOBR_RS08460
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 1,774,104 - -0.2 1,774,288 + AZOBR_RS08450 0.19 -1.3 1,774,289 - AZOBR_RS08450 0.19 +0.9 1,774,394 - AZOBR_RS08450 0.32 -2.1 1,774,700 - AZOBR_RS08450 0.68 -0.2 1,774,708 + AZOBR_RS08450 0.69 +1.5 1,774,709 - AZOBR_RS08450 0.69 -2.3 1,774,709 - AZOBR_RS08450 0.69 -0.9 1,774,709 - AZOBR_RS08450 0.69 +0.7 1,774,709 - AZOBR_RS08450 0.69 -0.5 1,774,747 + AZOBR_RS08450 0.73 +0.4 1,774,747 + AZOBR_RS08450 0.73 -0.9 1,774,748 - AZOBR_RS08450 0.73 +0.6 1,775,079 - +0.8 1,775,079 - -0.4 1,775,079 - +0.9 1,775,264 + AZOBR_RS08455 0.29 -0.3 1,775,264 + AZOBR_RS08455 0.29 +0.2 1,775,264 + AZOBR_RS08455 0.29 -1.2 1,775,265 - AZOBR_RS08455 0.29 -0.8 1,775,265 - AZOBR_RS08455 0.29 +0.4 1,775,265 - AZOBR_RS08455 0.29 -2.3 1,775,265 - AZOBR_RS08455 0.29 +0.8 1,775,265 - AZOBR_RS08455 0.29 -1.1 1,775,603 + AZOBR_RS08455 0.66 +1.0 1,775,604 - AZOBR_RS08455 0.66 +0.3 1,775,869 - +0.8 1,776,086 + -0.5 1,776,087 - +0.8 1,776,379 - AZOBR_RS08460 0.22 -0.2 1,776,450 + AZOBR_RS08460 0.28 +1.7 1,776,451 - AZOBR_RS08460 0.28 +0.1 1,776,489 + AZOBR_RS08460 0.32 -2.6 1,776,489 + AZOBR_RS08460 0.32 +0.1 1,776,489 + AZOBR_RS08460 0.32 +0.6 1,776,489 + AZOBR_RS08460 0.32 +0.9 1,776,610 - AZOBR_RS08460 0.43 +1.3 1,776,631 - AZOBR_RS08460 0.45 +0.4 1,776,631 - AZOBR_RS08460 0.45 -0.6
Or see this region's nucleotide sequence