Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07595 and AZOBR_RS07600 are separated by 55 nucleotides AZOBR_RS07600 and AZOBR_RS07605 are separated by 100 nucleotides AZOBR_RS07605 and AZOBR_RS07610 are separated by 400 nucleotides
AZOBR_RS07595: AZOBR_RS07595 - ABC transporter ATP-binding protein, at 1,597,627 to 1,599,243
_RS07595
AZOBR_RS07600: AZOBR_RS07600 - type I secretion membrane fusion protein HlyD, at 1,599,299 to 1,600,660
_RS07600
AZOBR_RS07605: AZOBR_RS07605 - regulator, at 1,600,761 to 1,601,144
_RS07605
AZOBR_RS07610: AZOBR_RS07610 - hypothetical protein, at 1,601,545 to 1,602,081
_RS07610
Position (kb) 1599
1600
1601 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1598.419 kb on + strand, within AZOBR_RS07595 at 1598.419 kb on + strand, within AZOBR_RS07595 at 1598.420 kb on - strand, within AZOBR_RS07595 at 1598.743 kb on + strand, within AZOBR_RS07595 at 1598.744 kb on - strand, within AZOBR_RS07595 at 1598.744 kb on - strand, within AZOBR_RS07595 at 1598.744 kb on - strand, within AZOBR_RS07595 at 1598.885 kb on - strand, within AZOBR_RS07595 at 1598.962 kb on + strand, within AZOBR_RS07595 at 1599.298 kb on + strand at 1599.323 kb on + strand at 1599.324 kb on - strand at 1600.400 kb on + strand, within AZOBR_RS07600 at 1600.442 kb on + strand, within AZOBR_RS07600 at 1600.442 kb on + strand, within AZOBR_RS07600 at 1600.443 kb on - strand, within AZOBR_RS07600 at 1600.443 kb on - strand, within AZOBR_RS07600 at 1600.443 kb on - strand, within AZOBR_RS07600 at 1600.443 kb on - strand, within AZOBR_RS07600 at 1600.443 kb on - strand, within AZOBR_RS07600 at 1600.490 kb on + strand, within AZOBR_RS07600 at 1600.608 kb on - strand at 1600.634 kb on + strand at 1600.894 kb on + strand, within AZOBR_RS07605 at 1600.925 kb on - strand, within AZOBR_RS07605 at 1600.925 kb on - strand, within AZOBR_RS07605 at 1600.925 kb on - strand, within AZOBR_RS07605 at 1601.302 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 1,598,419 + AZOBR_RS07595 0.49 +1.2 1,598,419 + AZOBR_RS07595 0.49 +1.7 1,598,420 - AZOBR_RS07595 0.49 -0.4 1,598,743 + AZOBR_RS07595 0.69 -0.3 1,598,744 - AZOBR_RS07595 0.69 -0.4 1,598,744 - AZOBR_RS07595 0.69 -0.2 1,598,744 - AZOBR_RS07595 0.69 -1.9 1,598,885 - AZOBR_RS07595 0.78 +0.9 1,598,962 + AZOBR_RS07595 0.83 +0.5 1,599,298 + -0.1 1,599,323 + +0.2 1,599,324 - -3.5 1,600,400 + AZOBR_RS07600 0.81 +0.0 1,600,442 + AZOBR_RS07600 0.84 -0.5 1,600,442 + AZOBR_RS07600 0.84 -1.5 1,600,443 - AZOBR_RS07600 0.84 +1.0 1,600,443 - AZOBR_RS07600 0.84 -0.4 1,600,443 - AZOBR_RS07600 0.84 -1.3 1,600,443 - AZOBR_RS07600 0.84 -1.6 1,600,443 - AZOBR_RS07600 0.84 -0.3 1,600,490 + AZOBR_RS07600 0.87 -2.2 1,600,608 - -2.3 1,600,634 + -1.8 1,600,894 + AZOBR_RS07605 0.35 -1.5 1,600,925 - AZOBR_RS07605 0.43 +0.4 1,600,925 - AZOBR_RS07605 0.43 +0.3 1,600,925 - AZOBR_RS07605 0.43 +0.3 1,601,302 + +1.2
Or see this region's nucleotide sequence