Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07490 and AZOBR_RS07495 are separated by 24 nucleotides
AZOBR_RS07490: AZOBR_RS07490 - anthranilate synthase subunit I, at 1,575,186 to 1,576,697
_RS07490
AZOBR_RS07495: AZOBR_RS07495 - peptidylprolyl isomerase, at 1,576,722 to 1,578,608
_RS07495
Position (kb)
1576
1577
1578
1579 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1575.965 kb on - strand, within AZOBR_RS07490 at 1575.965 kb on - strand, within AZOBR_RS07490 at 1575.995 kb on - strand, within AZOBR_RS07490 at 1575.995 kb on - strand, within AZOBR_RS07490 at 1575.995 kb on - strand, within AZOBR_RS07490 at 1576.124 kb on - strand, within AZOBR_RS07490 at 1576.297 kb on + strand, within AZOBR_RS07490 at 1576.298 kb on - strand, within AZOBR_RS07490 at 1576.414 kb on + strand, within AZOBR_RS07490 at 1576.414 kb on + strand, within AZOBR_RS07490 at 1576.414 kb on + strand, within AZOBR_RS07490 at 1576.507 kb on + strand, within AZOBR_RS07490 at 1576.588 kb on + strand at 1576.589 kb on - strand at 1576.589 kb on - strand at 1576.724 kb on - strand at 1576.724 kb on - strand at 1576.727 kb on + strand at 1576.728 kb on - strand at 1576.778 kb on - strand at 1577.236 kb on + strand, within AZOBR_RS07495 at 1577.236 kb on + strand, within AZOBR_RS07495 at 1577.236 kb on + strand, within AZOBR_RS07495 at 1577.236 kb on + strand, within AZOBR_RS07495 at 1577.236 kb on + strand, within AZOBR_RS07495 at 1577.237 kb on - strand, within AZOBR_RS07495 at 1577.237 kb on - strand, within AZOBR_RS07495 at 1577.237 kb on - strand, within AZOBR_RS07495 at 1577.237 kb on - strand, within AZOBR_RS07495 at 1577.474 kb on - strand, within AZOBR_RS07495 at 1577.840 kb on - strand, within AZOBR_RS07495 at 1577.959 kb on + strand, within AZOBR_RS07495 at 1578.157 kb on + strand, within AZOBR_RS07495 at 1578.158 kb on - strand, within AZOBR_RS07495 at 1578.586 kb on + strand at 1578.660 kb on + strand at 1578.660 kb on + strand at 1578.660 kb on + strand at 1578.661 kb on - strand at 1578.661 kb on - strand at 1578.661 kb on - strand at 1578.661 kb on - strand at 1578.661 kb on - strand at 1578.661 kb on - strand at 1578.661 kb on - strand at 1578.758 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 1,575,965 - AZOBR_RS07490 0.52 -0.4 1,575,965 - AZOBR_RS07490 0.52 +0.5 1,575,995 - AZOBR_RS07490 0.54 +1.2 1,575,995 - AZOBR_RS07490 0.54 -1.4 1,575,995 - AZOBR_RS07490 0.54 -0.1 1,576,124 - AZOBR_RS07490 0.62 +3.2 1,576,297 + AZOBR_RS07490 0.73 -1.6 1,576,298 - AZOBR_RS07490 0.74 -0.5 1,576,414 + AZOBR_RS07490 0.81 +0.0 1,576,414 + AZOBR_RS07490 0.81 -0.4 1,576,414 + AZOBR_RS07490 0.81 -0.3 1,576,507 + AZOBR_RS07490 0.87 -0.2 1,576,588 + -1.1 1,576,589 - +0.1 1,576,589 - -2.6 1,576,724 - +0.5 1,576,724 - -2.1 1,576,727 + -2.9 1,576,728 - -3.5 1,576,778 - +1.2 1,577,236 + AZOBR_RS07495 0.27 -0.4 1,577,236 + AZOBR_RS07495 0.27 +0.2 1,577,236 + AZOBR_RS07495 0.27 +0.6 1,577,236 + AZOBR_RS07495 0.27 +2.2 1,577,236 + AZOBR_RS07495 0.27 +0.6 1,577,237 - AZOBR_RS07495 0.27 +2.2 1,577,237 - AZOBR_RS07495 0.27 +1.2 1,577,237 - AZOBR_RS07495 0.27 -0.1 1,577,237 - AZOBR_RS07495 0.27 +0.6 1,577,474 - AZOBR_RS07495 0.40 -1.6 1,577,840 - AZOBR_RS07495 0.59 -0.4 1,577,959 + AZOBR_RS07495 0.66 -0.1 1,578,157 + AZOBR_RS07495 0.76 +0.6 1,578,158 - AZOBR_RS07495 0.76 +0.6 1,578,586 + -0.4 1,578,660 + -0.1 1,578,660 + +3.6 1,578,660 + +1.2 1,578,661 - +0.2 1,578,661 - -1.8 1,578,661 - +0.2 1,578,661 - +0.2 1,578,661 - -0.7 1,578,661 - +0.2 1,578,661 - -0.8 1,578,758 - +3.5
Or see this region's nucleotide sequence