Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03155 and AZOBR_RS03160 are separated by 104 nucleotides AZOBR_RS03160 and AZOBR_RS03165 are separated by 66 nucleotides
AZOBR_RS03155: AZOBR_RS03155 - iron ABC transporter permease, at 671,948 to 673,672
_RS03155
AZOBR_RS03160: AZOBR_RS03160 - pirin, at 673,777 to 674,625
_RS03160
AZOBR_RS03165: AZOBR_RS03165 - iron deficiency-induced protein A, at 674,692 to 675,720
_RS03165
Position (kb) 673
674
675 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 673.738 kb on + strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.912 kb on + strand, within AZOBR_RS03160 at 673.912 kb on + strand, within AZOBR_RS03160 at 673.940 kb on - strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 674.185 kb on + strand, within AZOBR_RS03160 at 674.186 kb on - strand, within AZOBR_RS03160 at 674.315 kb on - strand, within AZOBR_RS03160 at 674.596 kb on + strand at 674.597 kb on - strand at 674.837 kb on + strand, within AZOBR_RS03165 at 674.838 kb on - strand, within AZOBR_RS03165 at 675.050 kb on + strand, within AZOBR_RS03165 at 675.050 kb on + strand, within AZOBR_RS03165 at 675.051 kb on - strand, within AZOBR_RS03165 at 675.051 kb on - strand, within AZOBR_RS03165 at 675.053 kb on + strand, within AZOBR_RS03165 at 675.053 kb on + strand, within AZOBR_RS03165 at 675.053 kb on + strand, within AZOBR_RS03165 at 675.054 kb on - strand at 675.054 kb on - strand, within AZOBR_RS03165 at 675.221 kb on + strand, within AZOBR_RS03165 at 675.221 kb on + strand, within AZOBR_RS03165 at 675.221 kb on + strand, within AZOBR_RS03165 at 675.222 kb on - strand, within AZOBR_RS03165 at 675.284 kb on + strand, within AZOBR_RS03165 at 675.285 kb on - strand, within AZOBR_RS03165 at 675.323 kb on + strand, within AZOBR_RS03165 at 675.323 kb on + strand, within AZOBR_RS03165 at 675.590 kb on + strand, within AZOBR_RS03165 at 675.611 kb on + strand, within AZOBR_RS03165
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 673,738 + -0.0 673,739 - -3.0 673,739 - +0.8 673,739 - -1.6 673,912 + AZOBR_RS03160 0.16 -3.9 673,912 + AZOBR_RS03160 0.16 -2.1 673,940 - AZOBR_RS03160 0.19 +0.5 673,990 + AZOBR_RS03160 0.25 -0.4 673,990 + AZOBR_RS03160 0.25 -1.7 673,990 + AZOBR_RS03160 0.25 +1.1 673,990 + AZOBR_RS03160 0.25 -1.7 673,990 + AZOBR_RS03160 0.25 +0.3 673,991 - AZOBR_RS03160 0.25 -0.7 673,991 - AZOBR_RS03160 0.25 -0.7 673,991 - AZOBR_RS03160 0.25 -3.2 673,991 - AZOBR_RS03160 0.25 -0.6 673,991 - AZOBR_RS03160 0.25 +0.1 674,185 + AZOBR_RS03160 0.48 -0.2 674,186 - AZOBR_RS03160 0.48 -0.4 674,315 - AZOBR_RS03160 0.63 -0.9 674,596 + -0.3 674,597 - +0.1 674,837 + AZOBR_RS03165 0.14 +0.5 674,838 - AZOBR_RS03165 0.14 +1.2 675,050 + AZOBR_RS03165 0.35 -1.4 675,050 + AZOBR_RS03165 0.35 +0.3 675,051 - AZOBR_RS03165 0.35 +1.2 675,051 - AZOBR_RS03165 0.35 +1.1 675,053 + AZOBR_RS03165 0.35 +1.6 675,053 + AZOBR_RS03165 0.35 +1.1 675,053 + AZOBR_RS03165 0.35 +0.6 675,054 - +2.3 675,054 - AZOBR_RS03165 0.35 +1.3 675,221 + AZOBR_RS03165 0.51 +1.7 675,221 + AZOBR_RS03165 0.51 +1.1 675,221 + AZOBR_RS03165 0.51 +1.0 675,222 - AZOBR_RS03165 0.52 +0.9 675,284 + AZOBR_RS03165 0.58 -0.4 675,285 - AZOBR_RS03165 0.58 +1.3 675,323 + AZOBR_RS03165 0.61 +0.7 675,323 + AZOBR_RS03165 0.61 +0.9 675,590 + AZOBR_RS03165 0.87 +1.2 675,611 + AZOBR_RS03165 0.89 +1.2
Or see this region's nucleotide sequence