Experiment: 2-pentyl-furan 2.671 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01260 and AZOBR_RS01265 are separated by 181 nucleotides AZOBR_RS01265 and AZOBR_RS01270 are separated by 14 nucleotides AZOBR_RS01270 and AZOBR_RS01275 are separated by 48 nucleotides
AZOBR_RS01260: AZOBR_RS01260 - enoyl-CoA hydratase, at 259,724 to 260,500
_RS01260
AZOBR_RS01265: AZOBR_RS01265 - hypothetical protein, at 260,682 to 261,083
_RS01265
AZOBR_RS01270: AZOBR_RS01270 - 5-hydroxymethyluracil DNA glycosylase, at 261,098 to 261,940
_RS01270
AZOBR_RS01275: AZOBR_RS01275 - hypothetical protein, at 261,989 to 263,533
_RS01275
Position (kb) 261
262 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 260.265 kb on + strand, within AZOBR_RS01260 at 260.266 kb on - strand, within AZOBR_RS01260 at 260.266 kb on - strand, within AZOBR_RS01260 at 260.266 kb on - strand, within AZOBR_RS01260 at 260.277 kb on + strand, within AZOBR_RS01260 at 260.278 kb on - strand, within AZOBR_RS01260 at 260.794 kb on + strand, within AZOBR_RS01265 at 260.794 kb on + strand, within AZOBR_RS01265 at 260.795 kb on - strand, within AZOBR_RS01265 at 261.083 kb on + strand at 261.084 kb on - strand at 261.084 kb on - strand at 261.084 kb on - strand at 261.094 kb on + strand at 261.094 kb on + strand at 261.094 kb on + strand at 261.094 kb on + strand at 261.094 kb on + strand at 261.094 kb on + strand at 261.094 kb on + strand at 261.095 kb on - strand at 261.095 kb on - strand at 261.095 kb on - strand at 261.095 kb on - strand at 261.096 kb on + strand at 261.096 kb on + strand at 261.097 kb on - strand at 261.120 kb on + strand at 261.120 kb on + strand at 261.121 kb on - strand at 261.121 kb on - strand at 261.217 kb on - strand, within AZOBR_RS01270 at 261.217 kb on - strand, within AZOBR_RS01270 at 261.414 kb on + strand, within AZOBR_RS01270 at 261.414 kb on + strand, within AZOBR_RS01270 at 261.414 kb on + strand, within AZOBR_RS01270 at 261.415 kb on - strand, within AZOBR_RS01270 at 261.415 kb on - strand, within AZOBR_RS01270 at 261.415 kb on - strand, within AZOBR_RS01270 at 261.415 kb on - strand, within AZOBR_RS01270 at 261.765 kb on + strand, within AZOBR_RS01270 at 261.765 kb on + strand, within AZOBR_RS01270 at 261.765 kb on + strand, within AZOBR_RS01270 at 261.765 kb on + strand, within AZOBR_RS01270 at 261.765 kb on + strand, within AZOBR_RS01270 at 261.766 kb on - strand, within AZOBR_RS01270 at 261.766 kb on - strand, within AZOBR_RS01270 at 261.766 kb on - strand, within AZOBR_RS01270 at 261.766 kb on - strand, within AZOBR_RS01270 at 262.095 kb on + strand at 262.518 kb on + strand, within AZOBR_RS01275 at 262.518 kb on + strand, within AZOBR_RS01275 at 262.519 kb on - strand, within AZOBR_RS01275 at 262.915 kb on - strand, within AZOBR_RS01275
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 2.671 mM remove 260,265 + AZOBR_RS01260 0.70 -2.1 260,266 - AZOBR_RS01260 0.70 -3.7 260,266 - AZOBR_RS01260 0.70 +0.4 260,266 - AZOBR_RS01260 0.70 -0.2 260,277 + AZOBR_RS01260 0.71 +0.4 260,278 - AZOBR_RS01260 0.71 +0.5 260,794 + AZOBR_RS01265 0.28 +0.1 260,794 + AZOBR_RS01265 0.28 +0.6 260,795 - AZOBR_RS01265 0.28 +0.3 261,083 + +2.1 261,084 - +0.1 261,084 - -0.4 261,084 - +0.7 261,094 + -0.0 261,094 + +1.4 261,094 + +1.4 261,094 + -0.9 261,094 + -0.1 261,094 + -0.5 261,094 + -0.3 261,095 - +0.1 261,095 - -1.0 261,095 - +0.5 261,095 - +1.9 261,096 + -0.5 261,096 + +0.0 261,097 - -0.9 261,120 + +1.3 261,120 + +0.6 261,121 - -0.3 261,121 - -1.2 261,217 - AZOBR_RS01270 0.14 -0.9 261,217 - AZOBR_RS01270 0.14 -1.7 261,414 + AZOBR_RS01270 0.37 -0.1 261,414 + AZOBR_RS01270 0.37 -0.2 261,414 + AZOBR_RS01270 0.37 -3.1 261,415 - AZOBR_RS01270 0.38 -1.2 261,415 - AZOBR_RS01270 0.38 -2.2 261,415 - AZOBR_RS01270 0.38 -0.1 261,415 - AZOBR_RS01270 0.38 -0.4 261,765 + AZOBR_RS01270 0.79 -0.5 261,765 + AZOBR_RS01270 0.79 -0.0 261,765 + AZOBR_RS01270 0.79 -0.5 261,765 + AZOBR_RS01270 0.79 -0.4 261,765 + AZOBR_RS01270 0.79 -0.1 261,766 - AZOBR_RS01270 0.79 +0.2 261,766 - AZOBR_RS01270 0.79 +0.0 261,766 - AZOBR_RS01270 0.79 -0.7 261,766 - AZOBR_RS01270 0.79 +2.5 262,095 + -2.7 262,518 + AZOBR_RS01275 0.34 -0.6 262,518 + AZOBR_RS01275 0.34 -0.1 262,519 - AZOBR_RS01275 0.34 -1.8 262,915 - AZOBR_RS01275 0.60 +1.2
Or see this region's nucleotide sequence