Strain Fitness in Pantoea sp. MT58 around IAI47_14655

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
3,091,922	-				+0.3
3,091,930	-				-0.1
3,091,974	-				+0.3
3,091,974	-				-0.3
3,091,977	-				+1.3
3,091,977	-				-1.5
3,091,980	-				-0.7
3,091,980	-				-0.1
3,091,980	-				-1.0
3,091,994	-				+0.3
3,091,994	-				-0.2
3,091,994	-				+0.7
3,091,998	-				+0.7
3,091,998	-				-0.6
3,091,998	-				+1.3
3,091,998	-				-0.1
3,091,998	-				+0.9
3,091,998	-				+1.0
3,091,998	-				-0.3
3,091,998	-				+0.1
3,091,998	-				-0.5
3,092,000	-				-0.3
3,092,017	-				+0.6
3,092,017	-				+0.1
3,092,017	-				+0.6
3,092,017	-				+0.9
3,092,017	-				+1.0
3,092,029	-				-0.2
3,092,698	-				-1.3
3,092,702	-				-1.3
3,092,702	-				+0.2
3,092,785	-				-0.7
3,092,785	-				-1.0
3,092,794	-				+0.5
3,092,825	+				+1.9
3,092,825	+				+0.7
3,092,826	-				-1.0
3,092,885	-				-0.7
3,092,885	-				+0.5
3,092,888	+				+0.7
3,092,888	+				-1.3
3,092,896	+				-0.7
3,092,896	+				+2.6
3,092,897	-				-0.9
3,092,897	-				+0.2
3,092,962	+				+0.5
3,092,975	+				-0.7
3,093,046	-				-0.0
3,093,046	-				-1.5
3,093,046	-				+1.2
3,093,046	-				-0.2
3,093,099	+				+1.1
3,093,099	+				+1.1
3,093,100	-				+0.6
3,093,100	-				+1.1
3,093,100	-				+0.3
3,093,100	-				-1.3
3,093,128	+		IAI47_14660	0.11	-0.1
3,093,129	-		IAI47_14660	0.11	-0.7
3,093,158	+		IAI47_14660	0.13	-1.6
3,093,158	+		IAI47_14660	0.13	+0.1
3,093,158	+		IAI47_14660	0.13	+0.7
3,093,159	-		IAI47_14660	0.13	-0.8
3,093,159	-		IAI47_14660	0.13	+0.5
3,093,190	+		IAI47_14660	0.16	-0.3
3,093,191	-		IAI47_14660	0.16	+0.2
3,093,191	-		IAI47_14660	0.16	+0.6
3,093,400	-		IAI47_14660	0.32	+1.3
3,093,477	+		IAI47_14660	0.38	+2.3
3,093,477	+		IAI47_14660	0.38	+0.6
3,093,629	+		IAI47_14660	0.49	+1.1
3,093,630	-		IAI47_14660	0.49	-0.3
3,093,630	-		IAI47_14660	0.49	+1.3