Strain Fitness in Pantoea sp. MT58 around IAI47_12045

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,550,392	+				-0.9
2,550,392	+				-1.3
2,550,393	-				-1.0
2,550,398	+				+0.7
2,550,421	+				+0.0
2,550,422	-				+0.4
2,550,422	-				-0.9
2,552,089	-				-2.0
2,552,089	-				+1.0
2,552,089	-				+1.9
2,552,089	-				-0.8
2,552,089	-				-0.3
2,552,089	-				+4.4
2,552,089	-				-0.1
2,552,089	-				+1.9
2,552,089	-				-0.7
2,552,089	-				-1.3
2,552,089	-				-0.7
2,552,089	-				+0.0
2,552,089	-				-0.7
2,552,089	-				+1.1
2,552,089	-				+1.3
2,552,118	-		IAI47_12050	0.11	-0.9
2,552,118	-		IAI47_12050	0.11	+1.1
2,552,124	-		IAI47_12050	0.11	-0.1
2,552,124	-		IAI47_12050	0.11	-0.1
2,552,124	-		IAI47_12050	0.11	-0.4
2,552,124	-		IAI47_12050	0.11	-0.0
2,552,124	-		IAI47_12050	0.11	-0.8
2,552,211	-		IAI47_12050	0.20	+0.7
2,552,211	-		IAI47_12050	0.20	+0.8
2,552,211	-		IAI47_12050	0.20	+0.3
2,552,215	-		IAI47_12050	0.20	-0.0
2,552,215	-		IAI47_12050	0.20	-0.5
2,552,215	-		IAI47_12050	0.20	-0.0
2,552,220	-		IAI47_12050	0.21	-0.1
2,552,220	-		IAI47_12050	0.21	+0.6
2,552,220	-		IAI47_12050	0.21	+0.9
2,552,263	-		IAI47_12050	0.25	+0.3
2,552,263	-		IAI47_12050	0.25	+2.0
2,552,265	-		IAI47_12050	0.25	+0.5
2,552,265	-		IAI47_12050	0.25	-0.7
2,552,265	-		IAI47_12050	0.25	+0.3
2,552,265	-		IAI47_12050	0.25	+0.3
2,552,265	-		IAI47_12050	0.25	-1.3
2,552,265	-		IAI47_12050	0.25	+1.3
2,552,265	-		IAI47_12050	0.25	+0.8
2,552,265	-		IAI47_12050	0.25	-0.3
2,552,265	-		IAI47_12050	0.25	-1.1
2,552,283	-		IAI47_12050	0.27	+0.9
2,552,283	-		IAI47_12050	0.27	-1.0
2,552,283	-		IAI47_12050	0.27	-0.9
2,552,283	-		IAI47_12050	0.27	-0.9
2,552,332	-		IAI47_12050	0.32	-0.9
2,552,335	-		IAI47_12050	0.32	-0.2
2,552,335	-		IAI47_12050	0.32	+0.1
2,552,410	-		IAI47_12050	0.39	+0.3
2,552,427	-		IAI47_12050	0.41	+0.7
2,552,483	-		IAI47_12050	0.47	-0.2
2,552,529	-		IAI47_12050	0.51	+0.1
2,552,535	-		IAI47_12050	0.52	+1.1
2,552,535	-		IAI47_12050	0.52	-0.4
2,552,535	-		IAI47_12050	0.52	+0.6
2,552,535	-		IAI47_12050	0.52	-0.5
2,552,535	-		IAI47_12050	0.52	+0.5
2,552,535	-		IAI47_12050	0.52	-0.1
2,552,535	-		IAI47_12050	0.52	-0.5
2,552,535	-		IAI47_12050	0.52	-0.3
2,552,535	-		IAI47_12050	0.52	+1.5
2,552,539	-		IAI47_12050	0.52	-0.6
2,552,539	-		IAI47_12050	0.52	+1.6
2,552,634	-		IAI47_12050	0.61	+0.3
2,552,634	-		IAI47_12050	0.61	+0.1
2,552,634	-		IAI47_12050	0.61	-0.3
2,552,634	-		IAI47_12050	0.61	-0.3
2,552,732	-		IAI47_12050	0.71	-1.1
2,552,744	-		IAI47_12050	0.72	+0.0
2,552,744	-		IAI47_12050	0.72	+1.3
2,552,744	-		IAI47_12050	0.72	-0.1
2,552,830	-		IAI47_12050	0.81	-0.3
2,552,902	-		IAI47_12050	0.88	+1.3
2,552,904	-		IAI47_12050	0.88	-0.1
2,552,904	-		IAI47_12050	0.88	-0.3
2,552,950	-				-1.8