Strain Fitness in Pantoea sp. MT58 around IAI47_04815

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
1,009,792	+		IAI47_04810	0.45	-0.1
1,009,792	+		IAI47_04810	0.45	-1.0
1,009,793	-		IAI47_04810	0.45	-0.1
1,009,809	+		IAI47_04810	0.46	-1.0
1,009,809	+		IAI47_04810	0.46	+0.0
1,009,809	+		IAI47_04810	0.46	+1.3
1,009,809	+		IAI47_04810	0.46	-0.4
1,009,809	+		IAI47_04810	0.46	+1.9
1,009,809	+		IAI47_04810	0.46	+0.8
1,009,828	+		IAI47_04810	0.47	-0.8
1,009,845	+		IAI47_04810	0.48	+0.5
1,009,845	+		IAI47_04810	0.48	+0.9
1,009,845	+		IAI47_04810	0.48	+0.9
1,009,966	-		IAI47_04810	0.56	-0.4
1,009,966	-		IAI47_04810	0.56	+0.8
1,010,003	+		IAI47_04810	0.58	-0.7
1,010,004	-		IAI47_04810	0.58	+1.8
1,010,051	-		IAI47_04810	0.61	-0.8
1,010,064	+		IAI47_04810	0.61	-0.8
1,010,064	+		IAI47_04810	0.61	-0.2
1,010,064	+		IAI47_04810	0.61	-0.1
1,010,064	+		IAI47_04810	0.61	+0.8
1,010,064	+		IAI47_04810	0.61	+0.3
1,010,065	-		IAI47_04810	0.61	+0.7
1,010,065	-		IAI47_04810	0.61	-0.7
1,010,065	-		IAI47_04810	0.61	+0.8
1,010,085	+		IAI47_04810	0.63	+0.9
1,010,085	+		IAI47_04810	0.63	+0.7
1,010,086	-		IAI47_04810	0.63	-0.1
1,010,130	+		IAI47_04810	0.65	-0.7
1,010,217	+		IAI47_04810	0.71	-1.2
1,010,217	+		IAI47_04810	0.71	+1.1
1,010,218	-		IAI47_04810	0.71	+2.9
1,010,218	-		IAI47_04810	0.71	+0.3
1,010,259	+		IAI47_04810	0.73	-0.5
1,010,259	+		IAI47_04810	0.73	-0.5
1,010,259	+		IAI47_04810	0.73	+0.3
1,010,260	-		IAI47_04810	0.73	-0.1
1,010,260	-		IAI47_04810	0.73	+0.8
1,010,293	+		IAI47_04810	0.75	-0.1
1,010,293	+		IAI47_04810	0.75	-0.8
1,010,337	-		IAI47_04810	0.78	-0.7
1,010,386	+		IAI47_04810	0.81	+2.2
1,010,386	+		IAI47_04810	0.81	-0.5
1,010,459	-		IAI47_04810	0.85	-0.7
1,010,459	-		IAI47_04810	0.85	-0.7
1,010,494	+		IAI47_04810	0.87	+0.8
1,010,494	+		IAI47_04810	0.87	-1.8
1,010,494	+		IAI47_04810	0.87	+0.3
1,010,495	-		IAI47_04810	0.87	-0.7
1,010,495	-		IAI47_04810	0.87	+0.1
1,010,495	-		IAI47_04810	0.87	-1.7
1,010,495	-		IAI47_04810	0.87	+2.3
1,010,495	-		IAI47_04810	0.87	+0.6
1,010,495	-		IAI47_04810	0.87	-0.7
1,010,495	-		IAI47_04810	0.87	+0.2
1,010,596	+				-2.1
1,010,597	-				-1.5
1,010,626	+				-1.4
1,010,626	+				+0.3
1,010,626	+				-0.0
1,010,626	+				+0.3
1,010,627	-				+0.3
1,010,627	-				-1.5
1,010,627	-				+0.0
1,010,704	+				+2.3
1,010,704	+				-0.3
1,010,704	+				-1.2
1,010,704	+				-0.9
1,010,704	+				-0.1
1,010,704	+				-0.9
1,010,705	-				+1.6
1,010,705	-				+1.0
1,010,723	-				-0.7
1,010,748	-				+2.1
1,011,684	-				+0.9
1,011,684	-				+0.5
1,011,684	-				+1.7
1,011,684	-				-1.7
1,011,684	-				+0.3
1,011,684	-				-0.0
1,011,684	-				+0.3
1,011,684	-				+0.1
1,011,685	+				-1.2
1,011,685	+				+0.9
1,011,685	+				+0.8
1,011,685	+				-0.6
1,011,685	+				-0.5
1,011,686	-				+0.2
1,011,686	-				+0.1
1,011,686	-				+0.3
1,011,686	-				-0.8
1,011,712	-				+1.9
1,011,712	-				+0.3
1,011,712	-				-1.5
1,011,712	-				-2.7
1,011,733	-				-1.0
1,011,733	-				+0.4
1,011,733	-				+0.9
1,011,747	+				-1.7
1,011,747	+				-0.5
1,011,747	+				-1.1
1,012,356	+				+0.8
1,012,356	+				-0.1
1,012,357	-				+0.3
1,012,362	+				+0.3
1,012,363	-				-0.1
1,012,589	+		IAI47_04825	0.23	-0.4
1,012,590	-		IAI47_04825	0.23	+0.1
1,012,590	-		IAI47_04825	0.23	-1.2
1,012,590	-		IAI47_04825	0.23	-0.9
1,012,590	-		IAI47_04825	0.23	+0.7