Strain Fitness in Pantoea sp. MT58 around IAI47_16170

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
3,423,497	-				+0.4
3,423,513	+				+0.8
3,423,513	+				-0.8
3,423,544	+				+0.4
3,423,545	-				-0.5
3,423,545	-				-0.2
3,423,577	-				-1.0
3,423,600	+				+0.0
3,423,600	+				+0.8
3,423,600	+				+1.4
3,423,600	+				-1.1
3,423,601	-				+0.9
3,423,601	-				-0.9
3,423,601	-				-0.4
3,423,604	-				+0.0
3,423,604	-				-1.2
3,423,604	-				-1.0
3,423,604	-				+0.2
3,423,604	-				+0.7
3,423,615	+				+0.9
3,423,616	-				+0.6
3,423,616	-				-0.9
3,423,616	-				-0.3
3,423,616	-				-0.8
3,423,616	-				-0.6
3,423,617	+				-0.0
3,423,617	+				+1.6
3,423,617	+				+2.0
3,423,617	+				+1.0
3,423,617	+				+0.0
3,423,617	+				-0.2
3,423,617	+				+0.2
3,423,617	+				+0.2
3,423,617	+				-0.8
3,423,617	+				-0.8
3,423,618	-				+0.4
3,423,618	-				+1.2
3,423,618	-				-1.2
3,423,618	-				-0.2
3,423,618	-				-0.6
3,423,618	-				-0.8
3,423,666	+				+0.4
3,423,666	+				+0.2
3,423,667	-				+0.7
3,423,673	+				-0.1
3,423,674	-				-0.8
3,423,723	-				+1.7
3,423,723	-				+1.2
3,423,723	-				+1.0
3,423,738	-				+0.2
3,423,738	-				-0.1
3,423,738	-				-0.5
3,423,738	-				+1.0
3,424,833	-				-0.9
3,424,833	-				+0.2
3,424,865	-				-0.5
3,424,924	-				-0.3
3,424,924	-				+0.5
3,424,924	-				-0.0
3,424,924	-				-0.7
3,424,924	-				+0.9
3,425,252	-		IAI47_16175	0.17	+0.7