Strain Fitness in Pantoea sp. MT58 around IAI47_16150

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
3,420,772	-				+1.2
3,420,772	-				+1.0
3,420,772	-				-0.5
3,420,772	-				+0.5
3,420,774	-				+0.2
3,420,774	-				-0.8
3,420,774	-				-0.0
3,420,796	-				+1.1
3,420,823	-				-0.3
3,420,856	+				-0.8
3,420,857	-				+0.2
3,420,857	-				-1.8
3,420,857	-				+0.8
3,420,871	+				-1.3
3,420,876	-				-1.8
3,420,880	+				-0.3
3,420,880	+				+0.2
3,420,921	+				+0.2
3,420,955	-				-1.6
3,421,369	+				+1.7
3,421,370	-				+0.0
3,421,456	+		IAI47_16160	0.12	+0.2
3,421,456	+		IAI47_16160	0.12	-0.2
3,421,456	+		IAI47_16160	0.12	+0.2
3,421,456	+		IAI47_16160	0.12	-0.8
3,421,456	+		IAI47_16160	0.12	-0.2
3,421,456	+		IAI47_16160	0.12	+1.0
3,421,456	+		IAI47_16160	0.12	+0.7
3,421,456	+		IAI47_16160	0.12	+1.2
3,421,456	+		IAI47_16160	0.12	-0.8
3,421,456	+		IAI47_16160	0.12	+0.6
3,421,456	+		IAI47_16160	0.12	+0.2
3,421,456	+		IAI47_16160	0.12	+1.7
3,421,457	-		IAI47_16160	0.12	+0.5
3,421,457	-		IAI47_16160	0.12	-0.6
3,421,457	-		IAI47_16160	0.12	+0.8
3,421,457	-		IAI47_16160	0.12	-0.8
3,421,457	-		IAI47_16160	0.12	-0.1
3,421,457	-		IAI47_16160	0.12	+0.4
3,421,457	-		IAI47_16160	0.12	+0.2
3,421,457	-		IAI47_16160	0.12	+1.4
3,421,461	+		IAI47_16160	0.13	-0.9
3,421,461	+		IAI47_16160	0.13	+0.1
3,421,461	+		IAI47_16160	0.13	+0.4
3,421,461	+		IAI47_16160	0.13	+0.4
3,421,461	+		IAI47_16160	0.13	+2.0
3,421,462	-		IAI47_16160	0.13	-0.8
3,421,462	-		IAI47_16160	0.13	-0.2
3,421,462	-		IAI47_16160	0.13	-0.7
3,421,462	-		IAI47_16160	0.13	+1.8
3,421,477	+		IAI47_16160	0.14	+1.0
3,421,478	-		IAI47_16160	0.14	+0.1
3,421,478	-		IAI47_16160	0.14	+0.2
3,421,550	+		IAI47_16160	0.22	+1.1
3,421,550	+		IAI47_16160	0.22	+2.9
3,421,550	+		IAI47_16160	0.22	-0.5
3,421,550	+		IAI47_16160	0.22	+0.7
3,421,550	+		IAI47_16160	0.22	-0.8
3,421,551	-		IAI47_16160	0.22	+1.2
3,421,561	+		IAI47_16160	0.23	-0.1
3,421,562	-		IAI47_16160	0.24	+1.7
3,421,562	-		IAI47_16160	0.24	-1.0
3,421,562	-		IAI47_16160	0.24	+0.2
3,421,636	+		IAI47_16160	0.32	+0.2
3,421,637	-		IAI47_16160	0.32	+1.0