Strain Fitness in Pantoea sp. MT58 around IAI47_13740

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
2,908,153	+		IAI47_13735	0.72	+0.5
2,908,510	-				+1.4
2,908,659	-				+0.2
2,908,676	-		IAI47_13740	0.11	-0.8
2,909,052	-		IAI47_13740	0.41	-1.4
2,909,062	-		IAI47_13740	0.42	+1.2
2,909,209	-		IAI47_13740	0.54	-1.8
2,909,791	-				+0.7
2,909,791	-				+2.1
2,909,847	-				-2.1
2,909,847	-				-0.8
2,909,847	-				-0.8
2,909,847	-				-0.8
2,910,000	-				-3.8
2,910,226	-		IAI47_13745	0.16	-2.6
2,910,310	-		IAI47_13745	0.19	-0.8
2,910,310	-		IAI47_13745	0.19	-1.4
2,910,331	-		IAI47_13745	0.19	-2.1
2,910,456	+		IAI47_13745	0.24	-0.8
2,910,457	-		IAI47_13745	0.24	-2.6
2,910,457	-		IAI47_13745	0.24	-2.8
2,910,457	-		IAI47_13745	0.24	-3.7
2,910,670	-		IAI47_13745	0.32	-0.8
2,910,763	-		IAI47_13745	0.35	+0.2
2,910,763	-		IAI47_13745	0.35	-0.8