Strain Fitness in Pantoea sp. MT58 around IAI47_17695

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
3,755,765	+		IAI47_17690	0.51	+0.1
3,755,765	+		IAI47_17690	0.51	-0.4
3,755,765	+		IAI47_17690	0.51	-0.7
3,755,766	-		IAI47_17690	0.51	+1.1
3,755,766	-		IAI47_17690	0.51	-1.0
3,755,766	-		IAI47_17690	0.51	+3.8
3,755,766	-		IAI47_17690	0.51	-0.2
3,755,860	+		IAI47_17690	0.57	-0.2
3,755,861	-		IAI47_17690	0.57	-0.1
3,755,861	-		IAI47_17690	0.57	+0.9
3,755,861	-		IAI47_17690	0.57	+0.6
3,755,861	-		IAI47_17690	0.57	+0.8
3,755,947	-		IAI47_17690	0.63	+1.2
3,756,129	+		IAI47_17690	0.75	-0.9
3,756,129	+		IAI47_17690	0.75	-0.9
3,756,129	+		IAI47_17690	0.75	+0.8
3,756,130	-		IAI47_17690	0.75	-0.3
3,756,130	-		IAI47_17690	0.75	+0.3
3,756,163	+		IAI47_17690	0.77	-0.2
3,756,163	+		IAI47_17690	0.77	-0.9
3,756,163	+		IAI47_17690	0.77	+0.1
3,756,163	+		IAI47_17690	0.77	-0.4
3,756,164	-		IAI47_17690	0.77	+0.3
3,756,184	+		IAI47_17690	0.78	-0.2
3,756,184	+		IAI47_17690	0.78	+0.4
3,756,184	+		IAI47_17690	0.78	+0.8
3,756,184	+		IAI47_17690	0.78	-0.2
3,756,184	+		IAI47_17690	0.78	-0.7
3,756,184	+		IAI47_17690	0.78	-0.8
3,756,184	+		IAI47_17690	0.78	+0.8
3,756,184	+		IAI47_17690	0.78	-0.5
3,756,184	+		IAI47_17690	0.78	+0.0
3,756,184	+		IAI47_17690	0.78	-0.4
3,756,184	+		IAI47_17690	0.78	+0.3
3,756,184	+		IAI47_17690	0.78	+1.3
3,756,184	+		IAI47_17690	0.78	+0.1
3,756,184	+		IAI47_17690	0.78	+0.9
3,756,184	+		IAI47_17690	0.78	+0.1
3,756,184	+		IAI47_17690	0.78	+2.7
3,756,184	+		IAI47_17690	0.78	+1.7
3,756,185	-		IAI47_17690	0.78	+0.3
3,756,185	-		IAI47_17690	0.78	+1.0
3,756,185	-		IAI47_17690	0.78	-1.0
3,756,185	-		IAI47_17690	0.78	-0.7
3,756,185	-		IAI47_17690	0.78	-0.8
3,756,185	-		IAI47_17690	0.78	+0.3
3,756,185	-		IAI47_17690	0.78	+0.3
3,756,185	-		IAI47_17690	0.78	+0.0
3,756,185	-		IAI47_17690	0.78	+0.1
3,756,185	-		IAI47_17690	0.78	-0.4
3,756,185	-		IAI47_17690	0.78	+0.3
3,756,185	-		IAI47_17690	0.78	-0.1
3,756,185	-		IAI47_17690	0.78	+0.6
3,756,185	-		IAI47_17690	0.78	+1.5
3,756,185	-		IAI47_17690	0.78	+0.9
3,756,185	-		IAI47_17690	0.78	+0.4
3,756,185	-		IAI47_17690	0.78	-1.0
3,756,185	-		IAI47_17690	0.78	-0.7
3,756,185	-		IAI47_17690	0.78	-0.5
3,756,185	-		IAI47_17690	0.78	-1.0
3,756,185	-		IAI47_17690	0.78	-0.1
3,756,186	+		IAI47_17690	0.79	+0.1
3,756,186	+		IAI47_17690	0.79	+1.2
3,756,186	+		IAI47_17690	0.79	+1.1
3,756,186	+		IAI47_17690	0.79	+0.6
3,756,186	+		IAI47_17690	0.79	+0.9
3,756,186	+		IAI47_17690	0.79	+0.3
3,756,186	+		IAI47_17690	0.79	+0.8
3,756,186	+		IAI47_17690	0.79	-0.2
3,756,186	+		IAI47_17690	0.79	+0.0
3,756,186	+		IAI47_17690	0.79	-0.5
3,756,186	+		IAI47_17690	0.79	-0.5
3,756,186	+		IAI47_17690	0.79	+1.5
3,756,186	+		IAI47_17690	0.79	-1.0
3,756,186	+		IAI47_17690	0.79	-0.1
3,756,186	+		IAI47_17690	0.79	-0.8
3,756,186	+		IAI47_17690	0.79	-0.1
3,756,186	+		IAI47_17690	0.79	-1.5
3,756,186	+		IAI47_17690	0.79	-1.5
3,756,186	+		IAI47_17690	0.79	-1.1
3,756,186	+		IAI47_17690	0.79	+1.2
3,756,186	+		IAI47_17690	0.79	-0.2
3,756,187	-		IAI47_17690	0.79	-0.4
3,756,187	-		IAI47_17690	0.79	-0.6
3,756,187	-		IAI47_17690	0.79	+2.7
3,756,187	-		IAI47_17690	0.79	-0.3
3,756,187	-		IAI47_17690	0.79	-0.5
3,756,187	-		IAI47_17690	0.79	+0.7
3,756,187	-		IAI47_17690	0.79	-0.7
3,756,187	-		IAI47_17690	0.79	-0.7
3,756,187	-		IAI47_17690	0.79	-0.1
3,756,187	-		IAI47_17690	0.79	+0.3
3,756,187	-		IAI47_17690	0.79	-0.1
3,756,187	-		IAI47_17690	0.79	-0.1
3,756,187	-		IAI47_17690	0.79	+1.1
3,756,187	-		IAI47_17690	0.79	-0.7
3,756,199	+		IAI47_17690	0.79	+0.1
3,756,199	+		IAI47_17690	0.79	-0.7
3,756,200	-		IAI47_17690	0.79	+0.1
3,756,200	-		IAI47_17690	0.79	-0.8
3,756,200	-		IAI47_17690	0.79	+0.1
3,756,210	-		IAI47_17690	0.80	-0.3
3,756,313	+		IAI47_17690	0.87	+0.3
3,756,313	+		IAI47_17690	0.87	-0.0
3,756,313	+		IAI47_17690	0.87	-0.5
3,756,314	-		IAI47_17690	0.87	-1.0
3,756,359	-		IAI47_17690	0.90	+0.8
3,756,359	-		IAI47_17690	0.90	+0.5
3,756,359	-		IAI47_17690	0.90	-0.1
3,756,359	-		IAI47_17690	0.90	+1.3
3,756,359	-		IAI47_17690	0.90	-0.5
3,756,359	-		IAI47_17690	0.90	+1.6
3,756,427	+				+0.3
3,756,427	+				-0.7
3,756,427	+				-0.4
3,756,427	+				-0.4
3,756,427	+				-1.0
3,756,427	+				-0.8
3,756,427	+				-2.0
3,756,427	+				-0.7
3,756,427	+				-0.7
3,756,427	+				+0.7
3,756,427	+				+0.8
3,756,428	-				+0.3
3,756,428	-				-1.8
3,756,428	-				+1.2
3,756,428	-				+0.6
3,756,428	-				+0.9
3,756,428	-				-1.2
3,756,483	+				-1.8
3,756,483	+				-2.1
3,756,483	+				-1.5
3,756,483	+				-1.0
3,756,483	+				-0.4
3,756,484	-				+0.5
3,756,484	-				+0.3
3,756,484	-				-0.3
3,756,484	-				-0.7
3,756,484	-				+0.7
3,756,484	-				+0.7
3,756,511	+				-1.5
3,756,511	+				-0.7
3,756,512	-				-0.1
3,756,512	-				-1.1
3,756,591	+				-1.2
3,756,591	+				-2.7
3,756,591	+				-0.2
3,756,592	-				+0.5
3,756,592	-				+0.3
3,756,592	-				+0.4
3,756,592	-				+1.5
3,756,592	-				+0.0
3,756,608	+				-0.4
3,756,609	-				+2.7
3,756,638	+				-0.3
3,756,639	-				+0.6
3,756,639	-				+0.9
3,756,639	-				+0.6
3,756,639	-				-0.7
3,756,639	-				-0.1
3,756,642	-				-0.5
3,756,644	+				-0.1
3,756,644	+				+0.3
3,756,644	+				-0.7
3,756,644	+				+0.9
3,756,644	+				+0.4
3,756,645	-				+1.7
3,756,645	-				-1.1
3,756,645	-				-0.4
3,756,645	-				-0.7
3,756,645	-				+0.8
3,756,709	+				+0.3
3,756,746	+				-1.2
3,756,746	+				-2.1
3,756,762	+				-2.0
3,756,762	+				-2.0
3,756,763	-				-1.2
3,756,763	-				-2.8
3,756,828	-				-2.7
3,756,901	+		IAI47_17695	0.11	-3.5
3,756,987	+		IAI47_17695	0.17	-2.6
3,756,988	-		IAI47_17695	0.17	-0.7
3,757,019	+		IAI47_17695	0.19	-2.2
3,757,019	+		IAI47_17695	0.19	-2.7
3,757,019	+		IAI47_17695	0.19	-2.2
3,757,019	+		IAI47_17695	0.19	-2.8
3,757,019	+		IAI47_17695	0.19	-1.7
3,757,019	+		IAI47_17695	0.19	-1.7
3,757,019	+		IAI47_17695	0.19	-1.2
3,757,019	+		IAI47_17695	0.19	-1.7
3,757,019	+		IAI47_17695	0.19	-3.7
3,757,019	+		IAI47_17695	0.19	-2.7
3,757,019	+		IAI47_17695	0.19	-3.4
3,757,020	-		IAI47_17695	0.19	-2.8
3,757,020	-		IAI47_17695	0.19	-2.5
3,757,020	-		IAI47_17695	0.19	-3.2
3,757,020	-		IAI47_17695	0.19	+0.3
3,757,020	-		IAI47_17695	0.19	-2.2
3,757,020	-		IAI47_17695	0.19	-2.0
3,757,020	-		IAI47_17695	0.19	-4.1
3,757,020	-		IAI47_17695	0.19	-2.2
3,757,020	-		IAI47_17695	0.19	-1.0
3,757,020	-		IAI47_17695	0.19	+0.3
3,757,020	-		IAI47_17695	0.19	-2.2
3,757,173	+		IAI47_17695	0.29	-1.2
3,757,173	+		IAI47_17695	0.29	-0.7
3,757,173	+		IAI47_17695	0.29	-3.9
3,757,174	-		IAI47_17695	0.29	-2.7
3,757,174	-		IAI47_17695	0.29	-1.2
3,757,202	+		IAI47_17695	0.31	-1.7
3,757,202	+		IAI47_17695	0.31	-2.6
3,757,203	-		IAI47_17695	0.31	-3.2
3,757,203	-		IAI47_17695	0.31	-3.7
3,757,203	-		IAI47_17695	0.31	-3.5
3,757,212	+		IAI47_17695	0.32	-3.6
3,757,212	+		IAI47_17695	0.32	-2.0
3,757,212	+		IAI47_17695	0.32	-4.1
3,757,212	+		IAI47_17695	0.32	-3.2
3,757,212	+		IAI47_17695	0.32	-1.7
3,757,212	+		IAI47_17695	0.32	-3.9
3,757,212	+		IAI47_17695	0.32	-2.2
3,757,213	-		IAI47_17695	0.32	-4.1
3,757,228	-		IAI47_17695	0.33	-3.1
3,757,228	-		IAI47_17695	0.33	-2.6
3,757,228	-		IAI47_17695	0.33	-4.3
3,757,287	+		IAI47_17695	0.37	-2.0
3,757,287	+		IAI47_17695	0.37	-4.4
3,757,287	+		IAI47_17695	0.37	-3.0
3,757,288	-		IAI47_17695	0.37	-2.7
3,757,288	-		IAI47_17695	0.37	-3.7
3,757,288	-		IAI47_17695	0.37	-3.7
3,757,299	+		IAI47_17695	0.38	-3.7
3,757,299	+		IAI47_17695	0.38	-1.7
3,757,300	-		IAI47_17695	0.38	-2.0
3,757,300	-		IAI47_17695	0.38	-1.7
3,757,320	+		IAI47_17695	0.40	-1.7
3,757,344	+		IAI47_17695	0.41	-4.3
3,757,344	+		IAI47_17695	0.41	-3.5
3,757,344	+		IAI47_17695	0.41	-2.5
3,757,345	-		IAI47_17695	0.41	-3.1
3,757,345	-		IAI47_17695	0.41	-2.6
3,757,345	-		IAI47_17695	0.41	-4.8
3,757,355	+		IAI47_17695	0.42	-2.0
3,757,355	+		IAI47_17695	0.42	-1.5
3,757,355	+		IAI47_17695	0.42	-2.2
3,757,355	+		IAI47_17695	0.42	-2.0
3,757,356	-		IAI47_17695	0.42	-2.2
3,757,384	-		IAI47_17695	0.44	-4.0
3,757,384	-		IAI47_17695	0.44	-2.7
3,757,384	-		IAI47_17695	0.44	-3.1
3,757,404	+		IAI47_17695	0.45	-3.0
3,757,404	+		IAI47_17695	0.45	-1.7
3,757,405	-		IAI47_17695	0.45	-1.7
3,757,405	-		IAI47_17695	0.45	-0.7
3,757,444	+		IAI47_17695	0.48	-0.2
3,757,445	-		IAI47_17695	0.48	-0.7
3,757,480	+		IAI47_17695	0.51	-2.5
3,757,482	+		IAI47_17695	0.51	-0.7
3,757,482	+		IAI47_17695	0.51	-2.2
3,757,483	-		IAI47_17695	0.51	-2.7
3,757,535	+		IAI47_17695	0.54	-2.5
3,757,535	+		IAI47_17695	0.54	-1.7
3,757,535	+		IAI47_17695	0.54	-0.7
3,757,536	-		IAI47_17695	0.54	-0.1
3,757,536	-		IAI47_17695	0.54	-1.2
3,757,539	-		IAI47_17695	0.55	-0.7
3,757,539	-		IAI47_17695	0.55	-3.7
3,757,539	-		IAI47_17695	0.55	-3.4
3,757,562	+		IAI47_17695	0.56	-1.7
3,757,562	+		IAI47_17695	0.56	-4.0
3,757,563	-		IAI47_17695	0.56	-2.4
3,757,563	-		IAI47_17695	0.56	-2.5
3,757,600	+		IAI47_17695	0.59	-3.2
3,757,600	+		IAI47_17695	0.59	-2.0
3,757,601	-		IAI47_17695	0.59	-3.1
3,757,632	+		IAI47_17695	0.61	-3.0
3,757,633	-		IAI47_17695	0.61	+0.3
3,757,633	-		IAI47_17695	0.61	-2.0
3,757,635	-		IAI47_17695	0.61	-2.7
3,757,635	-		IAI47_17695	0.61	+0.3
3,757,635	-		IAI47_17695	0.61	-0.4
3,757,647	+		IAI47_17695	0.62	-0.7
3,757,648	-		IAI47_17695	0.62	-3.6
3,757,688	+		IAI47_17695	0.65	-2.7
3,757,689	-		IAI47_17695	0.65	-3.9
3,757,689	-		IAI47_17695	0.65	-3.1
3,757,689	-		IAI47_17695	0.65	-5.3
3,757,689	-		IAI47_17695	0.65	-3.1
3,757,734	+		IAI47_17695	0.68	-2.2
3,757,734	+		IAI47_17695	0.68	-2.0
3,757,735	-		IAI47_17695	0.68	-4.4
3,757,735	-		IAI47_17695	0.68	-1.5
3,757,818	+		IAI47_17695	0.74	-1.2
3,757,818	+		IAI47_17695	0.74	-3.7
3,757,818	+		IAI47_17695	0.74	-2.5
3,757,818	+		IAI47_17695	0.74	-3.0
3,757,819	-		IAI47_17695	0.74	-1.7
3,757,819	-		IAI47_17695	0.74	-3.4
3,757,819	-		IAI47_17695	0.74	-2.5
3,757,819	-		IAI47_17695	0.74	-0.7
3,757,819	-		IAI47_17695	0.74	-1.7
3,757,871	-		IAI47_17695	0.77	-3.1
3,757,903	-		IAI47_17695	0.80	-3.7
3,757,938	+		IAI47_17695	0.82	-2.0
3,757,939	-		IAI47_17695	0.82	-2.0
3,757,939	-		IAI47_17695	0.82	-3.1
3,757,939	-		IAI47_17695	0.82	-2.0
3,757,939	-		IAI47_17695	0.82	-2.8
3,758,011	+		IAI47_17695	0.87	-0.7
3,758,060	-				-2.0
3,758,060	-				-2.0
3,758,174	-				-1.7
3,758,174	-				-2.7
3,758,293	-		IAI47_17700	0.10	-1.7
3,758,369	+		IAI47_17700	0.19	-2.5
3,758,446	+		IAI47_17700	0.27	-1.2
3,758,446	+		IAI47_17700	0.27	+0.3
3,758,447	-		IAI47_17700	0.27	-5.3
3,758,447	-		IAI47_17700	0.27	-4.4
3,758,606	+		IAI47_17700	0.45	-3.7
3,758,606	+		IAI47_17700	0.45	-0.7
3,758,607	-		IAI47_17700	0.45	-2.0
3,758,612	+		IAI47_17700	0.45	-3.9
3,758,612	+		IAI47_17700	0.45	-2.8
3,758,612	+		IAI47_17700	0.45	+0.3
3,758,612	+		IAI47_17700	0.45	-1.2
3,758,612	+		IAI47_17700	0.45	-2.1
3,758,612	+		IAI47_17700	0.45	-3.8
3,758,612	+		IAI47_17700	0.45	-3.8
3,758,612	+		IAI47_17700	0.45	-0.7
3,758,613	-		IAI47_17700	0.45	-2.5
3,758,613	-		IAI47_17700	0.45	-4.3
3,758,648	-		IAI47_17700	0.49	-1.7
3,758,668	+		IAI47_17700	0.51	-2.5
3,758,668	+		IAI47_17700	0.51	-2.2
3,758,668	+		IAI47_17700	0.51	-2.5
3,758,668	+		IAI47_17700	0.51	-0.7
3,758,668	+		IAI47_17700	0.51	-3.0
3,758,668	+		IAI47_17700	0.51	-2.2
3,758,668	+		IAI47_17700	0.51	-3.7
3,758,668	+		IAI47_17700	0.51	-2.7
3,758,668	+		IAI47_17700	0.51	-3.0
3,758,668	+		IAI47_17700	0.51	-3.4
3,758,668	+		IAI47_17700	0.51	-1.7
3,758,668	+		IAI47_17700	0.51	-1.7
3,758,669	-		IAI47_17700	0.52	-2.0
3,758,669	-		IAI47_17700	0.52	-3.4
3,758,669	-		IAI47_17700	0.52	-3.0
3,758,669	-		IAI47_17700	0.52	-2.8
3,758,669	-		IAI47_17700	0.52	-2.5
3,758,669	-		IAI47_17700	0.52	-1.7
3,758,669	-		IAI47_17700	0.52	-3.6
3,758,718	-		IAI47_17700	0.57	-3.6
3,758,784	+		IAI47_17700	0.64	-2.5
3,758,784	+		IAI47_17700	0.64	-2.8
3,758,784	+		IAI47_17700	0.64	-2.0
3,758,784	+		IAI47_17700	0.64	-4.2
3,758,784	+		IAI47_17700	0.64	-3.2
3,758,785	-		IAI47_17700	0.64	-2.0
3,758,785	-		IAI47_17700	0.64	-2.2
3,758,785	-		IAI47_17700	0.64	-1.2
3,758,787	+		IAI47_17700	0.64	-1.2
3,758,787	+		IAI47_17700	0.64	-1.2
3,758,787	+		IAI47_17700	0.64	-0.7
3,758,788	-		IAI47_17700	0.65	-1.7
3,758,788	-		IAI47_17700	0.65	-1.7
3,758,788	-		IAI47_17700	0.65	-2.7
3,758,847	-		IAI47_17700	0.71	-1.0
3,758,906	-		IAI47_17700	0.78	-2.8
3,758,906	-		IAI47_17700	0.78	-3.8
3,758,906	-		IAI47_17700	0.78	-0.7
3,758,906	-		IAI47_17700	0.78	-1.7
3,759,003	-		IAI47_17700	0.88	-3.1
3,759,014	+		IAI47_17700	0.89	-2.8
3,759,156	+				-1.2