Strain Fitness in Pantoea sp. MT58 around IAI47_11715

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
2,483,401	+		IAI47_11705	0.88	+1.0
2,483,464	+				-0.4
2,483,464	+				-0.8
2,483,465	-				-1.0
2,483,465	-				-0.3
2,483,465	-				-1.0
2,483,475	+				-1.1
2,483,475	+				-1.2
2,483,475	+				-0.1
2,483,476	-				+0.9
2,483,476	-				+0.8
2,483,476	-				+0.2
2,483,476	-				-1.1
2,483,510	-				-1.6
2,483,523	+				-2.9
2,483,524	-				-0.3
2,483,534	+				-0.2
2,483,534	+				+0.4
2,483,535	-				-3.3
2,483,535	-				+1.0
2,483,571	+				-0.5
2,483,572	-				-1.1
2,483,606	+				-1.0
2,483,607	-				-0.2
2,483,607	-				-1.3
2,483,622	+				+0.0
2,483,625	+				-1.3
2,483,664	+				-0.8
2,483,695	-				-0.5
2,483,695	-				-0.0
2,483,715	+				-0.1
2,483,715	+				+0.1
2,483,715	+				+0.7
2,483,715	+				+0.1
2,483,715	+				-1.2
2,483,715	+				-0.3
2,483,716	-				-0.2
2,483,716	-				-1.0
2,483,720	-				+0.1
2,483,790	+				+1.0
2,483,791	-				+0.7
2,483,791	-				-0.1
2,483,826	+				-1.1
2,483,826	+				-0.3
2,483,826	+				+1.8
2,483,826	+				+0.4
2,483,826	+				-0.6
2,483,826	+				-1.6
2,483,827	-				+1.4
2,483,827	-				-1.3
2,483,827	-				+0.4
2,483,830	-				+0.5
2,483,869	-		IAI47_11710	0.10	+0.7
2,483,898	+		IAI47_11710	0.15	-0.3
2,483,898	+		IAI47_11710	0.15	-1.6
2,483,899	-		IAI47_11710	0.15	-1.6
2,483,899	-		IAI47_11710	0.15	-0.6
2,483,899	-		IAI47_11710	0.15	+2.0
2,483,960	+		IAI47_11710	0.26	+0.6
2,483,960	+		IAI47_11710	0.26	-0.2
2,483,960	+		IAI47_11710	0.26	+0.3
2,483,960	+		IAI47_11710	0.26	-0.7
2,483,961	-		IAI47_11710	0.26	+1.8
2,483,961	-		IAI47_11710	0.26	+0.2
2,483,961	-		IAI47_11710	0.26	-0.2
2,483,961	-		IAI47_11710	0.26	-0.2
2,483,961	-		IAI47_11710	0.26	-0.9
2,484,057	+		IAI47_11710	0.43	-0.1
2,484,107	+		IAI47_11710	0.52	-0.8
2,484,128	-		IAI47_11710	0.56	+0.7
2,484,142	+		IAI47_11710	0.59	+0.9
2,484,143	-		IAI47_11710	0.59	+0.0
2,484,217	+		IAI47_11710	0.72	-1.8
2,484,217	+		IAI47_11710	0.72	+0.8
2,484,218	-		IAI47_11710	0.72	+0.2
2,484,218	-		IAI47_11710	0.72	+0.2
2,484,218	-		IAI47_11710	0.72	+0.2
2,484,218	-		IAI47_11710	0.72	+0.2
2,484,219	+		IAI47_11710	0.72	-0.1
2,484,219	+		IAI47_11710	0.72	-0.2
2,484,219	+		IAI47_11710	0.72	+0.1
2,484,259	+		IAI47_11710	0.79	+0.1
2,484,259	+		IAI47_11710	0.79	+0.2
2,484,260	-		IAI47_11710	0.79	-1.3
2,484,260	-		IAI47_11710	0.79	+2.0
2,484,292	+		IAI47_11710	0.85	-0.1
2,484,292	+		IAI47_11710	0.85	+0.7
2,484,292	+		IAI47_11710	0.85	+0.4
2,484,292	+		IAI47_11710	0.85	-0.8
2,484,293	-		IAI47_11710	0.85	-1.0
2,484,293	-		IAI47_11710	0.85	+0.6
2,484,293	-		IAI47_11710	0.85	-1.3
2,484,347	-				-0.8
2,484,364	+				+1.4
2,484,470	+		IAI47_11715	0.15	+0.4
2,484,471	-		IAI47_11715	0.15	+0.4
2,484,471	-		IAI47_11715	0.15	-0.1
2,484,510	-		IAI47_11715	0.20	+0.2
2,484,548	+		IAI47_11715	0.25	+0.2
2,484,548	+		IAI47_11715	0.25	+0.5
2,484,549	-		IAI47_11715	0.26	-0.5
2,484,549	-		IAI47_11715	0.26	-1.3
2,484,551	-		IAI47_11715	0.26	+0.8
2,484,636	+		IAI47_11715	0.38	-0.0
2,484,712	-		IAI47_11715	0.48	+0.5
2,484,766	+		IAI47_11715	0.56	-0.8
2,484,766	+		IAI47_11715	0.56	+0.1
2,484,766	+		IAI47_11715	0.56	-2.3
2,484,787	+		IAI47_11715	0.58	-0.5
2,484,787	+		IAI47_11715	0.58	+0.3
2,484,787	+		IAI47_11715	0.58	-0.7
2,484,787	+		IAI47_11715	0.58	+0.7
2,484,787	+		IAI47_11715	0.58	-0.9
2,484,787	+		IAI47_11715	0.58	+0.0
2,484,788	-		IAI47_11715	0.59	-1.3
2,484,788	-		IAI47_11715	0.59	-0.1
2,484,788	-		IAI47_11715	0.59	-0.2
2,484,788	-		IAI47_11715	0.59	-0.8
2,484,909	+		IAI47_11715	0.75	-1.0
2,484,909	+		IAI47_11715	0.75	+0.1
2,484,962	-		IAI47_11715	0.83	+0.8
2,484,962	-		IAI47_11715	0.83	+0.2
2,484,992	+		IAI47_11715	0.87	+0.0
2,484,992	+		IAI47_11715	0.87	+0.7
2,484,993	-		IAI47_11715	0.87	-0.5
2,484,993	-		IAI47_11715	0.87	-0.4
2,484,993	-		IAI47_11715	0.87	-0.1
2,485,056	+				+2.6
2,485,057	-				+0.2
2,485,089	-				-0.9
2,485,104	+				+0.1
2,485,105	-				+0.6
2,485,252	+				+1.8
2,485,252	+				-1.8
2,485,255	+				-0.8
2,485,255	+				+0.1
2,485,255	+				-2.2
2,485,255	+				-0.3
2,485,256	-				-0.2
2,485,256	-				-1.8
2,485,256	-				-0.4
2,485,369	+		IAI47_11720	0.12	+0.2
2,485,417	+		IAI47_11720	0.18	-0.8
2,485,431	+		IAI47_11720	0.19	+0.2
2,485,432	-		IAI47_11720	0.20	+0.8
2,485,432	-		IAI47_11720	0.20	-1.0
2,485,468	+		IAI47_11720	0.24	+0.6
2,485,615	+		IAI47_11720	0.40	+0.1
2,485,615	+		IAI47_11720	0.40	-0.9
2,485,615	+		IAI47_11720	0.40	+0.9
2,485,615	+		IAI47_11720	0.40	+0.2
2,485,615	+		IAI47_11720	0.40	-1.3
2,485,616	-		IAI47_11720	0.40	-0.9
2,485,616	-		IAI47_11720	0.40	+0.2
2,485,616	-		IAI47_11720	0.40	-1.6
2,485,720	+		IAI47_11720	0.52	-0.9
2,485,720	+		IAI47_11720	0.52	-1.8
2,485,721	-		IAI47_11720	0.52	+1.0
2,485,838	+		IAI47_11720	0.65	+0.5
2,485,838	+		IAI47_11720	0.65	+0.8
2,485,838	+		IAI47_11720	0.65	+0.0
2,485,838	+		IAI47_11720	0.65	-0.6
2,485,838	+		IAI47_11720	0.65	-1.6
2,485,838	+		IAI47_11720	0.65	-0.8
2,485,839	-		IAI47_11720	0.66	-0.2
2,485,839	-		IAI47_11720	0.66	+0.7
2,485,884	-		IAI47_11720	0.71	+2.2
2,485,913	+		IAI47_11720	0.74	-1.1
2,485,913	+		IAI47_11720	0.74	+0.9
2,485,914	-		IAI47_11720	0.74	-0.4
2,485,914	-		IAI47_11720	0.74	-0.8
2,485,914	-		IAI47_11720	0.74	-0.1
2,485,915	+		IAI47_11720	0.74	-0.5
2,485,915	+		IAI47_11720	0.74	-0.3
2,485,915	+		IAI47_11720	0.74	-0.3
2,485,915	+		IAI47_11720	0.74	-0.6
2,485,915	+		IAI47_11720	0.74	+0.6
2,485,915	+		IAI47_11720	0.74	+0.7
2,485,916	-		IAI47_11720	0.74	+1.5
2,485,916	-		IAI47_11720	0.74	+0.2
2,485,916	-		IAI47_11720	0.74	-0.6
2,485,916	-		IAI47_11720	0.74	-0.6
2,485,925	+		IAI47_11720	0.75	+1.1
2,485,925	+		IAI47_11720	0.75	+1.8
2,485,925	+		IAI47_11720	0.75	-0.0
2,485,926	-		IAI47_11720	0.75	-0.3
2,485,926	-		IAI47_11720	0.75	+1.2
2,485,926	-		IAI47_11720	0.75	+0.2
2,485,926	-		IAI47_11720	0.75	+0.4
2,485,926	-		IAI47_11720	0.75	-0.2
2,485,927	+		IAI47_11720	0.75	+0.1
2,485,927	+		IAI47_11720	0.75	+0.3
2,485,927	+		IAI47_11720	0.75	+1.0
2,485,927	+		IAI47_11720	0.75	-1.3
2,485,927	+		IAI47_11720	0.75	+1.4
2,485,927	+		IAI47_11720	0.75	-0.1
2,485,927	+		IAI47_11720	0.75	-0.9
2,485,927	+		IAI47_11720	0.75	-0.0
2,485,927	+		IAI47_11720	0.75	+0.5
2,485,927	+		IAI47_11720	0.75	-0.8
2,485,928	-		IAI47_11720	0.76	-0.9
2,485,928	-		IAI47_11720	0.76	-0.4
2,485,928	-		IAI47_11720	0.76	+0.6
2,485,928	-		IAI47_11720	0.76	-0.9
2,485,928	-		IAI47_11720	0.76	-0.5
2,485,928	-		IAI47_11720	0.76	-0.1
2,485,928	-		IAI47_11720	0.76	-0.0
2,485,928	-		IAI47_11720	0.76	+0.7
2,485,928	-		IAI47_11720	0.76	-0.9
2,485,943	+		IAI47_11720	0.77	+0.6
2,485,943	+		IAI47_11720	0.77	-1.5
2,485,943	+		IAI47_11720	0.77	-1.1
2,485,943	+		IAI47_11720	0.77	-0.8
2,485,944	-		IAI47_11720	0.77	-1.9
2,485,944	-		IAI47_11720	0.77	+0.3
2,485,944	-		IAI47_11720	0.77	+0.5
2,485,967	+		IAI47_11720	0.80	+0.2
2,485,967	+		IAI47_11720	0.80	+0.0
2,485,968	-		IAI47_11720	0.80	+0.1
2,486,013	+		IAI47_11720	0.85	-0.2
2,486,014	-		IAI47_11720	0.85	-0.3
2,486,038	+		IAI47_11720	0.88	-0.0
2,486,039	-		IAI47_11720	0.88	-2.1
2,486,044	+		IAI47_11720	0.89	-0.8