Strain Fitness in Pantoea sp. MT58 around IAI47_08430

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
1,785,864	+				+0.1
1,785,864	+				+1.8
1,785,865	-				+1.6
1,785,872	+				-0.8
1,785,874	+				+1.0
1,785,874	+				-0.9
1,785,875	-				+0.2
1,785,901	+				-1.2
1,785,901	+				-0.3
1,785,902	-				+0.8
1,786,127	+		IAI47_08430	0.60	-0.2
1,786,127	+		IAI47_08430	0.60	-0.3
1,786,128	-		IAI47_08430	0.61	-1.4
1,786,147	+		IAI47_08430	0.65	-0.9
1,786,148	-		IAI47_08430	0.65	-1.4
1,786,251	+		IAI47_08430	0.89	+0.6
1,786,252	-		IAI47_08430	0.89	-0.8
1,786,252	-		IAI47_08430	0.89	-0.6
1,786,291	+				-0.8
1,786,292	-				-0.0
1,786,331	+				+0.6
1,786,332	-				+0.1
1,786,336	+				-0.8
1,786,337	-				+0.1
1,786,337	-				-0.4
1,786,362	-				-0.8
1,786,378	+				+0.2
1,786,378	+				-0.9
1,786,378	+				+2.0
1,786,378	+				+0.1
1,786,378	+				+0.5
1,786,378	+				-0.2
1,786,378	+				+2.0
1,786,378	+				+0.4
1,786,378	+				+0.8
1,786,379	-				-0.9
1,786,379	-				+2.6
1,786,380	+				-0.8
1,786,380	+				-0.3
1,786,380	+				+0.9
1,786,380	+				+1.3
1,786,380	+				-0.7
1,786,380	+				-2.4
1,786,380	+				-1.0
1,786,380	+				-1.8
1,786,381	-				-0.4
1,786,402	+				+0.2
1,786,402	+				+0.5
1,786,419	+				+1.8
1,786,444	+				+1.0
1,786,444	+				-0.8
1,786,444	+				+0.2
1,786,444	+				-0.8
1,786,444	+				-0.6
1,786,444	+				+0.6
1,786,444	+				+2.4
1,786,445	-				+0.2
1,786,445	-				-0.8
1,786,452	+				+0.7
1,786,452	+				+0.4
1,786,452	+				+0.9
1,786,453	-				+2.8
1,786,501	+				+0.5
1,786,512	+				-0.1
1,786,512	+				+2.1
1,786,512	+				+1.0
1,786,512	+				+0.6
1,786,513	-				-1.5
1,786,560	+				-0.0
1,786,597	+				+1.0
1,786,597	+				-0.4
1,786,597	+				+0.6
1,786,597	+				-0.6
1,786,597	+				-1.4
1,786,639	+				+1.0
1,786,639	+				-1.4
1,786,639	+				-0.8
1,786,841	+		IAI47_08435	0.35	+1.5
1,786,841	+		IAI47_08435	0.35	-0.8
1,786,906	+		IAI47_08435	0.43	-1.0
1,786,976	+		IAI47_08435	0.53	+1.2
1,787,078	+		IAI47_08435	0.67	+1.4
1,787,078	+		IAI47_08435	0.67	+1.1
1,787,078	+		IAI47_08435	0.67	-0.8
1,787,078	+		IAI47_08435	0.67	+1.8
1,787,078	+		IAI47_08435	0.67	+0.6
1,787,282	+				+0.2
1,787,282	+				-0.2