Strain Fitness in Pantoea sp. MT58 around IAI47_07790

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
1,648,512	+		IAI47_07785	0.23	-0.8
1,648,515	+		IAI47_07785	0.23	-0.8
1,648,515	+		IAI47_07785	0.23	-0.6
1,648,515	+		IAI47_07785	0.23	-0.5
1,648,515	+		IAI47_07785	0.23	+0.2
1,648,516	-		IAI47_07785	0.23	-0.8
1,648,516	-		IAI47_07785	0.23	+0.8
1,648,516	-		IAI47_07785	0.23	+0.4
1,648,516	-		IAI47_07785	0.23	+0.2
1,648,675	-		IAI47_07785	0.37	-0.8
1,648,675	-		IAI47_07785	0.37	-0.3
1,648,675	-		IAI47_07785	0.37	-0.7
1,648,727	+		IAI47_07785	0.42	+0.8
1,648,727	+		IAI47_07785	0.42	-0.2
1,648,762	+		IAI47_07785	0.45	+0.2
1,648,762	+		IAI47_07785	0.45	-0.0
1,648,763	-		IAI47_07785	0.45	-1.0
1,648,780	+		IAI47_07785	0.47	+0.7
1,648,792	+		IAI47_07785	0.48	+0.1
1,648,793	-		IAI47_07785	0.48	-0.5
1,648,793	-		IAI47_07785	0.48	+2.4
1,648,804	+		IAI47_07785	0.49	+0.4
1,648,804	+		IAI47_07785	0.49	+0.2
1,648,804	+		IAI47_07785	0.49	-0.2
1,648,812	+		IAI47_07785	0.50	-0.1
1,648,813	-		IAI47_07785	0.50	-0.4
1,648,813	-		IAI47_07785	0.50	-1.3
1,649,152	+		IAI47_07785	0.79	+0.6
1,649,153	-		IAI47_07785	0.80	-0.8
1,649,248	-		IAI47_07785	0.88	+1.3
1,649,264	+		IAI47_07785	0.89	+1.6
1,649,265	-		IAI47_07785	0.89	-0.3
1,649,380	+				+0.3
1,649,381	-				+0.8
1,649,381	-				-0.8
1,649,381	-				+1.2
1,649,381	-				-0.1
1,649,432	+				-1.3
1,649,432	+				+0.7
1,649,490	+		IAI47_07790	0.20	+0.6
1,649,490	+		IAI47_07790	0.20	-0.4
1,649,490	+		IAI47_07790	0.20	-0.1
1,649,491	-		IAI47_07790	0.20	-0.2
1,649,491	-		IAI47_07790	0.20	+0.8
1,649,491	-		IAI47_07790	0.20	+0.2
1,649,655	-		IAI47_07790	0.50	+0.2
1,649,902	+				+0.2
1,649,903	-				-0.9
1,649,946	+				+1.2
1,649,947	-				+0.8
1,649,947	-				-0.4
1,649,963	+				-0.2
1,649,964	-				-0.2
1,649,964	-				+0.4
1,649,965	+				-0.8
1,649,965	+				-0.3
1,649,965	+				-0.2
1,649,965	+				-0.3
1,649,966	-				+0.9
1,649,966	-				-0.8
1,649,966	-				-0.0
1,649,966	-				-0.8
1,649,966	-				+0.2
1,649,985	+				+1.0
1,650,072	+		IAI47_07795	0.11	-0.6
1,650,072	+		IAI47_07795	0.11	+0.2
1,650,208	+		IAI47_07795	0.29	-0.4
1,650,311	-		IAI47_07795	0.42	+0.7
1,650,311	-		IAI47_07795	0.42	-0.3
1,650,348	-		IAI47_07795	0.47	-1.5
1,650,427	+		IAI47_07795	0.57	+1.1
1,650,427	+		IAI47_07795	0.57	+1.0
1,650,471	+		IAI47_07795	0.63	+0.5
1,650,472	-		IAI47_07795	0.63	-0.3
1,650,472	-		IAI47_07795	0.63	-0.1
1,650,602	+		IAI47_07795	0.80	-0.2
1,650,660	+		IAI47_07795	0.87	+1.6
1,650,660	+		IAI47_07795	0.87	+1.2
1,650,660	+		IAI47_07795	0.87	+0.8
1,650,661	-		IAI47_07795	0.88	+1.8
1,650,661	-		IAI47_07795	0.88	-0.0
1,650,795	+				+1.0
1,650,795	+				-0.5
1,650,795	+				+0.8
1,650,796	-				-0.6
1,650,796	-				+0.6
1,650,796	-				-0.3
1,650,796	-				+1.4
1,650,796	-				+0.7
1,650,799	-				-1.5