Strain Fitness in Pantoea sp. MT58 around IAI47_06720

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
1,399,274	-		IAI47_06715	0.26	-0.7
1,399,419	+		IAI47_06715	0.38	-0.3
1,399,419	+		IAI47_06715	0.38	-0.3
1,399,516	+		IAI47_06715	0.47	-0.5
1,399,522	-		IAI47_06715	0.48	-0.6
1,399,588	+		IAI47_06715	0.53	-1.3
1,399,608	-		IAI47_06715	0.55	+1.9
1,399,608	-		IAI47_06715	0.55	+1.2
1,399,608	-		IAI47_06715	0.55	+1.9
1,399,628	+		IAI47_06715	0.57	+0.2
1,399,710	+		IAI47_06715	0.64	-0.5
1,399,711	-		IAI47_06715	0.64	+0.8
1,399,711	-		IAI47_06715	0.64	+0.3
1,399,747	+		IAI47_06715	0.67	+0.4
1,399,847	-		IAI47_06715	0.76	-0.4
1,399,909	+		IAI47_06715	0.82	+1.1
1,399,909	+		IAI47_06715	0.82	+1.5
1,399,909	+		IAI47_06715	0.82	+0.9
1,399,909	+		IAI47_06715	0.82	-0.1
1,399,910	-		IAI47_06715	0.82	-0.2
1,399,910	-		IAI47_06715	0.82	+0.8
1,399,910	-		IAI47_06715	0.82	+1.7
1,399,910	-		IAI47_06715	0.82	-0.4
1,399,910	-		IAI47_06715	0.82	+0.9
1,399,910	-		IAI47_06715	0.82	+2.3
1,399,977	-		IAI47_06715	0.88	-0.5
1,399,977	-		IAI47_06715	0.88	+1.6
1,399,977	-		IAI47_06715	0.88	+1.1
1,400,031	+				-0.9
1,400,031	+				-1.5
1,400,031	+				-0.7
1,400,032	-				+2.2
1,400,032	-				-0.7
1,400,032	-				+0.5
1,400,032	-				-0.4
1,400,172	+				+1.2
1,400,172	+				+1.1
1,400,172	+				+0.6
1,400,184	+				-1.6
1,400,897	+				+1.2
1,400,897	+				+0.1
1,400,897	+				+0.7
1,400,897	+				-0.4
1,400,898	-				-3.6
1,400,920	+				+0.3
1,400,921	-				+1.1
1,400,921	-				+1.0
1,400,961	+				-0.7
1,401,017	+				+0.3
1,401,017	+				-0.1
1,401,018	-				-0.6
1,401,018	-				+0.6
1,401,018	-				+0.1
1,401,018	-				+0.0
1,401,049	-				+0.1
1,401,053	+				+0.3
1,401,053	+				+0.3
1,401,053	+				+0.3
1,401,053	+				-0.4
1,401,054	-				-0.2
1,401,072	-		IAI47_06725	0.10	+1.9
1,401,241	+		IAI47_06725	0.25	+0.6
1,401,242	-		IAI47_06725	0.25	+2.9
1,401,282	+		IAI47_06725	0.28	-0.5
1,401,282	+		IAI47_06725	0.28	+0.3
1,401,283	-		IAI47_06725	0.29	-1.0
1,401,351	-		IAI47_06725	0.34	+0.9
1,401,366	+		IAI47_06725	0.36	+0.6
1,401,425	+		IAI47_06725	0.41	-1.3
1,401,425	+		IAI47_06725	0.41	-0.5
1,401,426	-		IAI47_06725	0.41	+1.1
1,401,426	-		IAI47_06725	0.41	-1.8
1,401,459	+		IAI47_06725	0.44	+1.7
1,401,459	+		IAI47_06725	0.44	-1.1
1,401,459	+		IAI47_06725	0.44	-0.2
1,401,460	-		IAI47_06725	0.44	-2.0
1,401,499	+		IAI47_06725	0.47	+0.6
1,401,552	+		IAI47_06725	0.52	+0.5
1,401,553	-		IAI47_06725	0.52	+0.3
1,401,639	+		IAI47_06725	0.59	+0.6
1,401,640	-		IAI47_06725	0.59	-0.5
1,401,640	-		IAI47_06725	0.59	-0.6
1,401,665	-		IAI47_06725	0.61	-2.5
1,401,715	+		IAI47_06725	0.66	-0.3
1,401,715	+		IAI47_06725	0.66	+0.1
1,401,716	-		IAI47_06725	0.66	-0.1
1,401,782	+		IAI47_06725	0.71	+0.3
1,401,782	+		IAI47_06725	0.71	+1.9
1,401,782	+		IAI47_06725	0.71	-0.8
1,401,782	+		IAI47_06725	0.71	+0.1
1,401,782	+		IAI47_06725	0.71	-0.3
1,401,783	-		IAI47_06725	0.72	-0.1
1,401,813	+		IAI47_06725	0.74	+0.3
1,401,814	-		IAI47_06725	0.74	-0.1
1,401,846	+		IAI47_06725	0.77	-0.5
1,401,846	+		IAI47_06725	0.77	+0.0
1,401,847	-		IAI47_06725	0.77	-2.7
1,401,847	-		IAI47_06725	0.77	+0.5
1,401,885	+		IAI47_06725	0.80	-0.0
1,401,885	+		IAI47_06725	0.80	-0.8
1,401,885	+		IAI47_06725	0.80	+0.3
1,401,885	+		IAI47_06725	0.80	-1.0
1,401,885	+		IAI47_06725	0.80	-0.9
1,401,885	+		IAI47_06725	0.80	-0.3
1,401,886	-		IAI47_06725	0.80	+0.1
1,401,886	-		IAI47_06725	0.80	-1.7
1,401,886	-		IAI47_06725	0.80	-0.3